Gene Sde_1674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1674 
Symbol 
ID3965151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2141595 
End bp2142746 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content46% 
IMG OID637920755 
Producthypothetical protein 
Protein accessionYP_527146 
Protein GI90021319 
COG category[S] Function unknown 
COG ID[COG2850] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAA CTCTCCGGCC ATTTACCCAC CTTGGTGACA TGCCAATAGA AACGTTTTTG 
CGGGACTACT GGCAAAAAAA GCCACTACTT ATTCGCCAAG CCCTACCCAA CTTTGAAAGC
CCATTAAGTG CAGATGAGCT GGCAGGGCTT TGCTTAGAAG ACGATGTAAT TTCTCGCTTA
ATTACCGAAA CACCACAAAG CTCACCGTTT AACAGCGAAT GGAACGTAAC CCACGGGCCA
TTACCAGAAG ATATTTTCGA AACACTTCCC GAGAATTATT GGTCTTTACT GGTACAACAC
GTCGATCAAT TATCTCCCGA AGTGAACCAG CTACTAAACC TATTTCGCTT TATTCCCAAT
TGGCGCCTAG ACGACGTAAT GATTAGCTAT GCTCCAGACA AAGGCGGTGT AGGCCCTCAT
TTCGACTATT ACGACGTATT TTTATTGCAA GGTCACGGCC AGCGGCGTTG GCGATTGGGG
CAACAGTGCA CCAGCAAAAG CCCAATGCTT GCCAATGCGC CCATGAAAGT ACTAACAGAG
TTTGATGTAC AAGAAGACTG GGTTTTAAAC CCAGGTGATA TTTTGTACGT GCCGCCAGGT
TTGGCTCACT GGGGCACAGC GGTAGGCGAA TCTATTACTT ACTCGGTAGG CTTTCGCGCC
CCAAGCCACC AAGATATAGT TTTAGATTTT TCACAAGAAG TGGCTTCTAA AATTGAGGAA
GATAACCGCT ACCAAGACCA ATTTTTAACG GCGAATAAAA ATGCCGGCGA AATAACAGGC
GATGCTATCG AGCAGTTAAA ACACATACTG CAAACTTACA TGCAAGACGA GCAAGCCTTG
GCCCAATGGC TAGGCAAAAG TATGACCCAA CTTAATCCAG GCATGGTAGA CGAAGCGGAA
AACACCATCG AACCAGAAGA AATGGCGAAT ACGCCATTTA CGCTTTCACC ATTTGCGCGA
GCAACGTTTT ACCGAGCAGA CTCTAACAGC GAAGCGTACA TATTTATTAA TGGCGAAGTG
TATTCTGGCT CGCTAGAGCT GGCAAACGCC CTAAGCAACT ACCTGCCAAT AGATTGGCTA
AGCTGCAGCG AAACCGACAA ATTAATATTA GATACCCTCG CCCAACAATA TTTACTTGTT
AGCTTAACCT AA
 
Protein sequence
MTQTLRPFTH LGDMPIETFL RDYWQKKPLL IRQALPNFES PLSADELAGL CLEDDVISRL 
ITETPQSSPF NSEWNVTHGP LPEDIFETLP ENYWSLLVQH VDQLSPEVNQ LLNLFRFIPN
WRLDDVMISY APDKGGVGPH FDYYDVFLLQ GHGQRRWRLG QQCTSKSPML ANAPMKVLTE
FDVQEDWVLN PGDILYVPPG LAHWGTAVGE SITYSVGFRA PSHQDIVLDF SQEVASKIEE
DNRYQDQFLT ANKNAGEITG DAIEQLKHIL QTYMQDEQAL AQWLGKSMTQ LNPGMVDEAE
NTIEPEEMAN TPFTLSPFAR ATFYRADSNS EAYIFINGEV YSGSLELANA LSNYLPIDWL
SCSETDKLIL DTLAQQYLLV SLT