Gene Sde_1669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1669 
Symbol 
ID3965146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2136466 
End bp2137191 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content48% 
IMG OID637920750 
Productphosphoadenosine phosphosulfate reductase 
Protein accessionYP_527141 
Protein GI90021314 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin)
[TIGR02055] thioredoxin-dependent adenylylsulfate APS reductase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.400633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA CCATCGACTT CACCGATATT GATGCGAAGC TGCAACAAGC TTCACCGCAA 
GAAATACTCG CTTACGCGCT TGCCGAAAAC GACAACCTCG CAATATCGTT TAGCGGTGCA
GAAGATGTTG TACTAGTTGA TATGGCTTCT AAAATAAAAC CCGGCGTTCA GGTGTTTTGT
TTAGATACTG GCAGATTACA TGCAGAGACC TACCAATTTA TTGAGCAAGT ACGCAAACAC
TACGATATTA AGCTCGACGT GTTGTTTCCA GATTCTGCCG CAGTACAGAA GCTTGTGGCG
GAAAAAGGCC TTTTTAGCTT TTTCGAAGAC AATCACCAAG AATGCTGTGG CATACGCAAA
GTAGGCCCTC TGCGCAAAAA ACTATTGGAA GTAGACGCTT GGGTTACGGG CCAGCGCAAA
GATCAGAGCC CTGGCACACG CGCCTCTATT CCGGTAATCC AAAACGATCG TGTTTTTGCA
CGCCCAGGAG ACACCCTAAC CAAATTTAAC CCCTTGGTTA ATTGGACATC ACAACAGGTT
TGGGATTACA TTCGCTCTGA AGGCGTACCA TACAACAGCC TGCACGATCG AGGCTTTGTC
TCTATAGGCT GCGAACCCTG CACACGCCCA ACGGGCCCTG GCCAGCATGA GCGTGAAGGC
CGCTGGTGGT GGGAAGAAGC CACCAAGAAA GAATGCGGTT TACACGCCAC TAACGTTAAA
AAATAG
 
Protein sequence
MSNTIDFTDI DAKLQQASPQ EILAYALAEN DNLAISFSGA EDVVLVDMAS KIKPGVQVFC 
LDTGRLHAET YQFIEQVRKH YDIKLDVLFP DSAAVQKLVA EKGLFSFFED NHQECCGIRK
VGPLRKKLLE VDAWVTGQRK DQSPGTRASI PVIQNDRVFA RPGDTLTKFN PLVNWTSQQV
WDYIRSEGVP YNSLHDRGFV SIGCEPCTRP TGPGQHEREG RWWWEEATKK ECGLHATNVK
K