Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1669 |
Symbol | |
ID | 3965146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2136466 |
End bp | 2137191 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637920750 |
Product | phosphoadenosine phosphosulfate reductase |
Protein accession | YP_527141 |
Protein GI | 90021314 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes |
TIGRFAM ID | [TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin) [TIGR02055] thioredoxin-dependent adenylylsulfate APS reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.400633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACA CCATCGACTT CACCGATATT GATGCGAAGC TGCAACAAGC TTCACCGCAA GAAATACTCG CTTACGCGCT TGCCGAAAAC GACAACCTCG CAATATCGTT TAGCGGTGCA GAAGATGTTG TACTAGTTGA TATGGCTTCT AAAATAAAAC CCGGCGTTCA GGTGTTTTGT TTAGATACTG GCAGATTACA TGCAGAGACC TACCAATTTA TTGAGCAAGT ACGCAAACAC TACGATATTA AGCTCGACGT GTTGTTTCCA GATTCTGCCG CAGTACAGAA GCTTGTGGCG GAAAAAGGCC TTTTTAGCTT TTTCGAAGAC AATCACCAAG AATGCTGTGG CATACGCAAA GTAGGCCCTC TGCGCAAAAA ACTATTGGAA GTAGACGCTT GGGTTACGGG CCAGCGCAAA GATCAGAGCC CTGGCACACG CGCCTCTATT CCGGTAATCC AAAACGATCG TGTTTTTGCA CGCCCAGGAG ACACCCTAAC CAAATTTAAC CCCTTGGTTA ATTGGACATC ACAACAGGTT TGGGATTACA TTCGCTCTGA AGGCGTACCA TACAACAGCC TGCACGATCG AGGCTTTGTC TCTATAGGCT GCGAACCCTG CACACGCCCA ACGGGCCCTG GCCAGCATGA GCGTGAAGGC CGCTGGTGGT GGGAAGAAGC CACCAAGAAA GAATGCGGTT TACACGCCAC TAACGTTAAA AAATAG
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Protein sequence | MSNTIDFTDI DAKLQQASPQ EILAYALAEN DNLAISFSGA EDVVLVDMAS KIKPGVQVFC LDTGRLHAET YQFIEQVRKH YDIKLDVLFP DSAAVQKLVA EKGLFSFFED NHQECCGIRK VGPLRKKLLE VDAWVTGQRK DQSPGTRASI PVIQNDRVFA RPGDTLTKFN PLVNWTSQQV WDYIRSEGVP YNSLHDRGFV SIGCEPCTRP TGPGQHEREG RWWWEEATKK ECGLHATNVK K
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