| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1667 |
|---|
| Symbol | cysB |
|---|
| ID | 3965144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 2135028 |
|---|
| End bp | 2136002 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637920748 |
|---|
| Product | transcriptional regulator CysB |
|---|
| Protein accession | YP_527139 |
|---|
| Protein GI | 90021312 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00185974 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC AGCAGTTACG TTACATTTGG GAAGTCGCTC ATCACGAGCT AAACGTATCG
GCTACGGCAC AGAGCTTGTA CACATCGCAA CCTGGAATTA GTAAGCAGAT CCGGTTGCTA
GAAGATGAGC TAGGTGTAGA AATTTTTTCG CGCAGCGGCA AGCATTTAAC GCGCATTACT
CCTGCCGGGG AGGCAATACT TCGTACTGCG GGCGAGATAC TGCGTAAAGT AGAGAGCATT
AAGCAGGTTG CGCAGGAATT CAGCAACGAG CGTAAAGGCA GCCTATCTAT TGCTACTACG
CATACCCAGG CGCGCTACGC TTTACCGCCT GTAATAGGTA AGTTTATTCA AAACTACCCT
GATGTTTCGC TGCATATGAA TCAGGGTACG CCGATGCAAA TTTCTGAAAT GGCTGCAGAC
GGCACCGTAG ATTTTGCTAT CGCCACTGAG GCAATGGAGC TATTTAGCGA TTTAATTATG
TTGCCTTGCT ACAAGTGGAA CCGCTGTATT CTTGTTCCTA AGGGGCACCC ACTAACGCAG
TTATCGATGC TTAGCTTGGA AGATGTAGCT AAACACCCGC TGGTAACCTA TGTATTTGGG
TTCACCGGCC GCTCGCGCCT AGATGAAGCA TTTTTGGAGC ATGGTTTAGC GCCTAAGGTA
GTCTTTACCG CGGCAGATGC CGATGTAATT AAAACCTATG TACGCTTGGG CTTGGGCATA
GGTATTGTGG CTAAAATGGC CTACAACGAG CAGGAAGACA GTGATTTGGT GGCGCTGGAT
GCTAGTCACT TGTTCCGTGC TAGCACTACC AAAATAGGTT TCCGCAGGGG CACATTCTTA
CGCGGCTTTA TGTATGAGTT TATAGAGGCG TTTGCGCCGC ACCTTACTAA AGAGGTGGTA
AACGAGGCAT TTAACCGTCA TTCCAAGCTT GAATTGGATG AGCTGTTCTC TAATATCGAA
TTGCCTGAAT ATTAG
|
|---|
| Protein sequence | MKLQQLRYIW EVAHHELNVS ATAQSLYTSQ PGISKQIRLL EDELGVEIFS RSGKHLTRIT
PAGEAILRTA GEILRKVESI KQVAQEFSNE RKGSLSIATT HTQARYALPP VIGKFIQNYP
DVSLHMNQGT PMQISEMAAD GTVDFAIATE AMELFSDLIM LPCYKWNRCI LVPKGHPLTQ
LSMLSLEDVA KHPLVTYVFG FTGRSRLDEA FLEHGLAPKV VFTAADADVI KTYVRLGLGI
GIVAKMAYNE QEDSDLVALD ASHLFRASTT KIGFRRGTFL RGFMYEFIEA FAPHLTKEVV
NEAFNRHSKL ELDELFSNIE LPEY
|
|---|
| |