| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1664 |
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| Symbol | |
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| ID | 3965141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2131733 |
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| End bp | 2133091 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637920745 |
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| Product | seryl-tRNA synthetase, class IIA |
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| Protein accession | YP_527136 |
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| Protein GI | 90021309 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0197857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGT TATTGTCTGT GTTGAACACA GTAAGTGGCT GGGTATGGGG CGTACCCACC
TTAGCGCTGA TTTTGCTGGT GGGTATATGG CTTACCGTCA TTATTCGCGG GGTGTCTATT
ACCCGCATAC CATTTGCGTT TGTGCAGCTA ATAAGGGGGC GGTCGGCGAA TGGAGAGGGT
ACGGTAGCGC CTTTTTCCGC GCTGATGATG TCGCTTTCGG CAACTATTGG TACCGGTAAT
ATTGCTGGGG TGGCTACTGC CATTGGTCTA GGCGGCCCTG GGGCGTTGTT TTGGATGTGG
TGCAGCGCGC TGTTTGGCAT GGCAACAAAA TATGCCGAGG CCGTGTGTGC GGTGCACTAT
CGCGAAAAAA ACGCTGAGGG TAAGCACGTT GGCGGCCCGA TGTATTACAT CAAAAATGGT
TTAGGCAAGC GCTGGTTGTG GCTGGCTGCC TGCTTTGCAT TTTTTGGCTC GATTGCAGGC
TTTGGTATCG GCAACATGGT GCAGGCTAAC TCGGTGGCAG ATTCGCTCGC CGACGCATTT
GGTGTGAACC GTGTAATTAC TGCATTCGTG CTTATGATTT TAGTCGGGGC GGTTATCTGG
GGCGGCGTAA CTCGTATTGC AACGGTTGCT AAAAAGCTGG TGCCGTTAAT GGCGCTTTCT
TATTTGGTGG CAGGGGTAAT TGTACTGGGT GCTAACTTCG CTGAAATTCC CGCTGCAATT
GCTTTAGTGT TTAAAAGTGC TTTTAGCCCA GTGGCGGCGC AAGGTGGTTT TGCAGGTGCC
GCTGTTGCGC TGGCTATTGA AAAAGGTATT GCGCGCGGTG TGTTTTCTAA CGAAGCCGGC
TTAGGTAGTG CACCTATTGC ACACGCGGCA GCGGCAACTG ATAGCCCGGT GCGTCAAGGC
ACAATTGCTA TGTTAGGTAC TTTTATCGAT ACGTTGATTG TGTGCTCAAT TACAGGGCTG
GCGATAATTG TTAGCGGTGT ATGGGCAGGC ACAGAGCAGG GGGCGGCAAT GTCACAGGCT
GCGTTTAACA GTGTATTGCC ATACGGCGAC AAAATTGTCT CTGTGGCGTT GGTATTGTTT
GCTTTCACCA CAATAATAGG GTGGAGCTAC TACGGCGAGC GCTGCGTAGA ATATTTGTTT
GGGCGGGGCG CCATACGTGT TTTCCGTTAC GCTTGGGTTA TGGCTATTCC GGTTGGGGTT
ATGCTTAAGC TTGAAGTGGT TTGGATCATT GCGGATATTC TAAACGGGTT AATGGCACTG
CCAAACTTAG TCGCCCTGTT GTTGCTTTCT GGGGTGGTAG CAAAACTCAC GCGTGAATTT
TACGCGTCTA ATAAAGTTGA AAAGGCTGCG GATAAATAA
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| Protein sequence | MELLLSVLNT VSGWVWGVPT LALILLVGIW LTVIIRGVSI TRIPFAFVQL IRGRSANGEG
TVAPFSALMM SLSATIGTGN IAGVATAIGL GGPGALFWMW CSALFGMATK YAEAVCAVHY
REKNAEGKHV GGPMYYIKNG LGKRWLWLAA CFAFFGSIAG FGIGNMVQAN SVADSLADAF
GVNRVITAFV LMILVGAVIW GGVTRIATVA KKLVPLMALS YLVAGVIVLG ANFAEIPAAI
ALVFKSAFSP VAAQGGFAGA AVALAIEKGI ARGVFSNEAG LGSAPIAHAA AATDSPVRQG
TIAMLGTFID TLIVCSITGL AIIVSGVWAG TEQGAAMSQA AFNSVLPYGD KIVSVALVLF
AFTTIIGWSY YGERCVEYLF GRGAIRVFRY AWVMAIPVGV MLKLEVVWII ADILNGLMAL
PNLVALLLLS GVVAKLTREF YASNKVEKAA DK
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