| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1663 |
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| Symbol | |
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| ID | 3965140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2130657 |
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| End bp | 2131667 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920744 |
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| Product | D-cysteine desulfhydrase |
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| Protein accession | YP_527135 |
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| Protein GI | 90021308 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
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| TIGRFAM ID | [TIGR01275] pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000049313 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTATGA CAACTTATCG ACCTGCCAAA ACTTCACTTG CTAACCTTCC TACAGCGCTC
CAGCCATTAG ATCGTGTTTC TCAAATTTTG GGCGGCCCGC GTATTTGGCT TAAAAGAGAT
GATCTAACGG GCTCTACGTT AAGCGGCAAC AAGGTGCGTA AATTAGAGTA CGTGGTGGCT
GAGGCGCTCT CAAACGGCGC AGATACGCTA ATCACTTGCG GCGGGCTGCA ATCTAACCAT
TGTAGAGCTA CGGCGCTGGT GGCGGCTCAA CTCGGTTTAA AGGCCCACCT TATATTGCGC
GGCCAACAAA AGGGCAGTGC TGCCGATGGC AACCTACTGC TAGATGACCT TGCAGGTGCT
CAGATATCTC AATATTCAGT TGCAGACTAT TCCAAAAATC TAACATCGTT ATTCTCCCAT
TGGCAGAACC ATTACGCGCA GCAGGGGCGC AAGGCGTGGT GTATTCCTAC TGGGGCAAGC
GATGAAATAG GTATTTGGGG GTATATTGAT GCGTTTGCTG AGCTAGAAGC TCAGTTGGCA
GAGCGAGATA TTAACCCTGA TTTGGTGGTA TGCGCCACAG GTTCGGGCGG GACACAGGCT
GGATTAAGTT TAGGGGCCCA CATATTGGGG AGTAAAGCAA AGGTTGTGGG TATGGCTGTG
TGCGACTCAG AGGCTTACTT TGAGCGCAAA GCTAAACAAG ATATAACCCT GTGGCAGCAA
AAGTACGGGC AGGCAGCTGG AATATCTGCT CAGCAAGCTA CTCAGGTACA AATAAATACT
ATCGATAAAT ATATTGGCCC AGGATATGCA AAAGCCTACC CTGAGTTGCT GGAGCGTATT
CGCTGGTTGG CAGCCACCGA AGGGGTGGTG CTAGACCCCG TTTACACAGG CAAAGCATTT
TATGGGTTGG TGCAAGAAAT TAAATCGGGG CGCTGGGCAA ATATGAAAGA CATTGTATTT
GTACACACTG GGGGGATTTT TGGCCTTTTC CCCTATAGAG ATGAATTTTA G
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| Protein sequence | MPMTTYRPAK TSLANLPTAL QPLDRVSQIL GGPRIWLKRD DLTGSTLSGN KVRKLEYVVA
EALSNGADTL ITCGGLQSNH CRATALVAAQ LGLKAHLILR GQQKGSAADG NLLLDDLAGA
QISQYSVADY SKNLTSLFSH WQNHYAQQGR KAWCIPTGAS DEIGIWGYID AFAELEAQLA
ERDINPDLVV CATGSGGTQA GLSLGAHILG SKAKVVGMAV CDSEAYFERK AKQDITLWQQ
KYGQAAGISA QQATQVQINT IDKYIGPGYA KAYPELLERI RWLAATEGVV LDPVYTGKAF
YGLVQEIKSG RWANMKDIVF VHTGGIFGLF PYRDEF
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