| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1655 |
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| Symbol | |
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| ID | 3965171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2122727 |
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| End bp | 2124427 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920736 |
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| Product | translation initiation factor IF-1 |
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| Protein accession | YP_527127 |
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| Protein GI | 90021300 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0976225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTTT TACCTATCTT ACTCGTTAGC TTACTTCCAC TGCTCTCAAG CTGCACAAGC
GCCATAAACG GGCAACAAAA TAGCCAAACC TCGCCTGTAT TTGATTGGTT TGAATACGCG
GGAAGCGATG CTTTATACAA CACGGTTGCG CCAAGTAAAA ATGCCTATAC CAACCCAGTA
ATAAAAGGGT TTTATCCAGA TCCAAGCATT GTAAGAGTGG GAGCAGATTA CTACCTCGTG
AACTCTTCAT TTGGCTACTT CCCTGGCGTG CCGATATTTC ATAGCACAGA TTTAGTGAAT
TGGGTTCAAA TAGGTAATAT TCTCGAGCGC CCATCACAAT TACAAATACC CAGCGGCATG
GGTGTGTCGC GAGGTATATT CGCCCCAACA CTGCGCCACC ACAACGGTAT TTTTTACATG
ATTACTACAA TGGTAGACGG TGGCGGCAAT TTTATTGTTA CTGCAAAAAA CCCCGCAGGC
CCTTGGTCGG ACCCAGTATG GTTACCTGAA GTGGGCGGTA TAGACCCAGA TTTATTTTTT
GATGACAACG GCAAAGCCTA CATACTTAAC AACGACGCCC CCATTGGCGA GCCGCTTTAC
GATGGCCACC GAGCCATTTG GATTCGCGAA TTCGACTTAG CCACATTAAA AACCGTTGGC
GACGCCAAGT TAATAGTAAA CGGCGGTGTA GATATAACTA CCAAACCCGT TTGGATAGAA
GGCCCACACC TTTTCAAAAA TAAAGGCGCT TACTATTTAA TTAATGCAGA AGGTGGCACC
AGCGTGAATC ACAGCCAAGT TGTATTTAAA GCGCAAAGCC CTTGGGGGCC GTATATTCCT
TGGGAAAACA ATCCAATTTT AACACAGCGC CATTTACCGG CTGATCGCGC CAACCCCGTC
ACATCCGTTG GCCATGTCGA TTTAGTACAA ACTCAACATG GCGACTGGTG GGCGGTATTT
TTAGGCTGCA GGCCCTATAA AGATAACTAC TACAATACCG GCCGCGAAAC ATTTTTATTA
CCGGTAGATT GGTCTGGCGA ATACCCCGTC ATTCTTCGCG GCGATGCCGA GGTGCCCTAT
CATCACCAAC GCCCCCAATT GGGAGCATCC CAACAACCAG CCATTGCCCT TAGCGGTAAC
TTTATTGAGC GCGATGAATT TGACTCAGCA CTTAAACTTT ATTGGCGCAA GGTTCGCACC
CCCACAAACA ACTTTACAGA TTTAACCTCT CAAAAAGGCA AGCTTGTTTT AACTGCAAAC
AATACAGATT TAAGCGACTT TGGATCACCA GCATTTATTG CGCGCGCACA GCAGCACCTA
ACAGGCAGCG CAACAACCAA ACTGGTTTAC ACACCCCCAC ACGTGGGCGA CAAAGCGGGT
ATTGCTGCCT TTCAAAACGA TGAGTATTTT TATGCGCTTA CCGTTACAAA AAATAATAGC
GGCCTTGCCA TACAACTAGA AAAACAACTT GGCAAGAACA AAGAAATTGT TGCGCAATAT
CCACTACAAG AAAAAACGCT TCGCAATGGC TTATATTTGA AAATAGAATT TAATAACGAC
AAATATGATT TCAGCTATTC CACAAATAAC ACCAAGTGGC AATCGGTAGG CGAAACACAA
GATGGAACTA TATTAAGCAC GCAAAGTGCA GGCGGGTTTG TAGGTGCCAC GCTAGGTATA
TTTGCATATA CCGCGCACTA A
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| Protein sequence | MRLLPILLVS LLPLLSSCTS AINGQQNSQT SPVFDWFEYA GSDALYNTVA PSKNAYTNPV
IKGFYPDPSI VRVGADYYLV NSSFGYFPGV PIFHSTDLVN WVQIGNILER PSQLQIPSGM
GVSRGIFAPT LRHHNGIFYM ITTMVDGGGN FIVTAKNPAG PWSDPVWLPE VGGIDPDLFF
DDNGKAYILN NDAPIGEPLY DGHRAIWIRE FDLATLKTVG DAKLIVNGGV DITTKPVWIE
GPHLFKNKGA YYLINAEGGT SVNHSQVVFK AQSPWGPYIP WENNPILTQR HLPADRANPV
TSVGHVDLVQ TQHGDWWAVF LGCRPYKDNY YNTGRETFLL PVDWSGEYPV ILRGDAEVPY
HHQRPQLGAS QQPAIALSGN FIERDEFDSA LKLYWRKVRT PTNNFTDLTS QKGKLVLTAN
NTDLSDFGSP AFIARAQQHL TGSATTKLVY TPPHVGDKAG IAAFQNDEYF YALTVTKNNS
GLAIQLEKQL GKNKEIVAQY PLQEKTLRNG LYLKIEFNND KYDFSYSTNN TKWQSVGETQ
DGTILSTQSA GGFVGATLGI FAYTAH
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