Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1652 |
Symbol | |
ID | 3965168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2120272 |
End bp | 2121267 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637920733 |
Product | DNA polymerase III, delta prime subunit |
Protein accession | YP_527124 |
Protein GI | 90021297 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0470] ATPase involved in DNA replication |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTAG TGCCCATGCC GCCGTACCCT TGGCTCGAGT CCGTATGGGA CGAGTTTGCA GAAAAGTTAG CCCAAAAGCG GGTTCCCCAC GCGCTGTTAA TTACAGGGCA AGAAGGTTTG GGGTCGGATA CCCTAGCTAA AGCCATGGGG CAGTTGCTGC TGTGCTTATC GCCATTAGAG GGGATAGCCT GCGGTAAGTG CAGAGCCTGC CAATTGCTGC AAGCAGGCAG CCACCCAGAT TTACTTTGGA TTGCGCCAGA AGAGGCGGGC AAGCAAATTA AAATAGACCA AATTCGCAGG GTTACCGAGT TTGTATCTAA AACGGCTCAG CAGGGCGGTA AAAAGGTCGT GGTGGTTACG CCCACCGAAG CGATGAATAA TAATTCATCC AATGCCTTGC TAAAAAGCTT GGAAGAGCCT GCTGGGGATA CCGTACTTAT TTTAATTACT TTCCAAGAAA GCCAAATACT ACCCACCATT CGCAGCCGCT GTGCACGTAT TGTGCTTACC ACACCCTCTT ACGATGTGGC GCAAAGTTGG CTGCAAGAAA ATGGCCACCA AGCTGCAATA CCTTTGCTAG GGGAAGCGGG CGGTGCGCCA CTTAAAGGCG TAGAGTGGCT TAAAACGGAA TACGTAGAGC AACGCCAAAA AGCCATGGCG TGTTTAGAGC AGCTAGCAAG CCAAACACGT GGCCCCGTAA GCGCGGTTGC TCAGCTGGGC GGCATAAGCG CCCCAGTGCT TGTAGAGTTA ATGCTTAACC TCGTGGATAG CCTTATTACA ACTAAGCTGG CACCTAGTAG CGTAAGGGCC GAACAGCGGC AGGAATCGAT TCAGCCGTTA GCCCAATATA TGGCACGTGT TTCTGGTCAG ATGCTATTTC GGTTTAGAGA ACGGCTGTGT GAGCAAAAGC TTAAATTAAT CCGCAATGCC AACCTTAATC AAACGTTATT TATTGAAGAA TTGCTGATGG ATTGGCAGTT GGTAGCAAAA AGCTAA
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Protein sequence | MSLVPMPPYP WLESVWDEFA EKLAQKRVPH ALLITGQEGL GSDTLAKAMG QLLLCLSPLE GIACGKCRAC QLLQAGSHPD LLWIAPEEAG KQIKIDQIRR VTEFVSKTAQ QGGKKVVVVT PTEAMNNNSS NALLKSLEEP AGDTVLILIT FQESQILPTI RSRCARIVLT TPSYDVAQSW LQENGHQAAI PLLGEAGGAP LKGVEWLKTE YVEQRQKAMA CLEQLASQTR GPVSAVAQLG GISAPVLVEL MLNLVDSLIT TKLAPSSVRA EQRQESIQPL AQYMARVSGQ MLFRFRERLC EQKLKLIRNA NLNQTLFIEE LLMDWQLVAK S
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