Gene Sde_1652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1652 
Symbol 
ID3965168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2120272 
End bp2121267 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content50% 
IMG OID637920733 
ProductDNA polymerase III, delta prime subunit 
Protein accessionYP_527124 
Protein GI90021297 
COG category[L] Replication, recombination and repair 
COG ID[COG0470] ATPase involved in DNA replication 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTAG TGCCCATGCC GCCGTACCCT TGGCTCGAGT CCGTATGGGA CGAGTTTGCA 
GAAAAGTTAG CCCAAAAGCG GGTTCCCCAC GCGCTGTTAA TTACAGGGCA AGAAGGTTTG
GGGTCGGATA CCCTAGCTAA AGCCATGGGG CAGTTGCTGC TGTGCTTATC GCCATTAGAG
GGGATAGCCT GCGGTAAGTG CAGAGCCTGC CAATTGCTGC AAGCAGGCAG CCACCCAGAT
TTACTTTGGA TTGCGCCAGA AGAGGCGGGC AAGCAAATTA AAATAGACCA AATTCGCAGG
GTTACCGAGT TTGTATCTAA AACGGCTCAG CAGGGCGGTA AAAAGGTCGT GGTGGTTACG
CCCACCGAAG CGATGAATAA TAATTCATCC AATGCCTTGC TAAAAAGCTT GGAAGAGCCT
GCTGGGGATA CCGTACTTAT TTTAATTACT TTCCAAGAAA GCCAAATACT ACCCACCATT
CGCAGCCGCT GTGCACGTAT TGTGCTTACC ACACCCTCTT ACGATGTGGC GCAAAGTTGG
CTGCAAGAAA ATGGCCACCA AGCTGCAATA CCTTTGCTAG GGGAAGCGGG CGGTGCGCCA
CTTAAAGGCG TAGAGTGGCT TAAAACGGAA TACGTAGAGC AACGCCAAAA AGCCATGGCG
TGTTTAGAGC AGCTAGCAAG CCAAACACGT GGCCCCGTAA GCGCGGTTGC TCAGCTGGGC
GGCATAAGCG CCCCAGTGCT TGTAGAGTTA ATGCTTAACC TCGTGGATAG CCTTATTACA
ACTAAGCTGG CACCTAGTAG CGTAAGGGCC GAACAGCGGC AGGAATCGAT TCAGCCGTTA
GCCCAATATA TGGCACGTGT TTCTGGTCAG ATGCTATTTC GGTTTAGAGA ACGGCTGTGT
GAGCAAAAGC TTAAATTAAT CCGCAATGCC AACCTTAATC AAACGTTATT TATTGAAGAA
TTGCTGATGG ATTGGCAGTT GGTAGCAAAA AGCTAA
 
Protein sequence
MSLVPMPPYP WLESVWDEFA EKLAQKRVPH ALLITGQEGL GSDTLAKAMG QLLLCLSPLE 
GIACGKCRAC QLLQAGSHPD LLWIAPEEAG KQIKIDQIRR VTEFVSKTAQ QGGKKVVVVT
PTEAMNNNSS NALLKSLEEP AGDTVLILIT FQESQILPTI RSRCARIVLT TPSYDVAQSW
LQENGHQAAI PLLGEAGGAP LKGVEWLKTE YVEQRQKAMA CLEQLASQTR GPVSAVAQLG
GISAPVLVEL MLNLVDSLIT TKLAPSSVRA EQRQESIQPL AQYMARVSGQ MLFRFRERLC
EQKLKLIRNA NLNQTLFIEE LLMDWQLVAK S