| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1635 |
|---|
| Symbol | |
|---|
| ID | 3965190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 2098337 |
|---|
| End bp | 2099554 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637920718 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_527109 |
|---|
| Protein GI | 90021282 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2081] Predicted flavoproteins |
|---|
| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACT TAGATTGTAT TGTAATTGGT GGCGGCGCCG CTGGCTTAAT GTGTGCGGCA
ACGGCAGGGC AGCGGGGTAA AAGCGTGGCA GTGTTAGATC ACGCCAATAA AGTGGGTAAA
AAAATACTTA TGTCCGGTGG TGGCCGGTGT AACTTCACCA ATTACTTTGT GGAGCCGGCA
AATTATTTAT CGCAAAATCC ACACTTTTGT AAATCTGCTT TAAGTCGCTA TACCCAATAC
GACTTTATCG AATTGGTATC GCGCTACAAC CTTGAATACC ACGAAAAAAC GCTCGGTCAA
CTTTTCTGTG ATCATAAAGC AAAAGATATC CTAAATATTT TACTTGCTGA ATGTGAATTG
GGCGGCGTGG AAATTACCAC CCAATGCTCG ATAGAAAAAG TAGAGCAGCT GACGGGCGAT
ACCGACTACC GTTTTAAACT GCACACAACA ATGGGTGCGT ACCGATGTAA ATCTTTAGTT
GTTGCTAGTG GTGGTTTATC TATTCCTACA ATGGGGGCAA CGGGCTTTGG TTACGACCTT
GCCAAGCAGT TTGGTTTGCG TATTACCGCC CGAGAGGCTT CGCTAGTGCC GTTTACGTTT
AAAGGCGAGC TATTAACCCT TGCGCAATCT CTGGCAGGCG TAGCGTTACC CGTTGTTATT
AGTTGTAATA ATCAAAGTTT TAAAGAGGCA ATGCTCTTTA CCCACAAGGG GATAAGTGGC
CCAGCAGTGC TGCAAATTTC TAACTACTGG TATAGCGGCA ATAATATAGA AATTAATTTT
TTACCCGATA TAGATCTAGC CGAACAAATT GCACAGTGGC AAAGTGAAAA ATCTAAATCG
GAACTCACAA CCTTGTTAAG TAGGCTTATG CCCAAGCGCT TTGTGGTTGC ATGGCTGGCA
GCCGAACACG CCAAAGCATG CGGTGCAAAT AGCATTGCCA ACAAAAATAT CGCCGACCTT
TCCCGATCCG ATATAGAAAT AATTGCAAAA TTATTTCACG CATGGCAATG CATGCCAGCA
GGTACCGAAG GCTACAAAAC CGCAGAGGTT ACCCGCGGCG GCGTAAATAC CGATGACGTC
TCATCCAAAA CCTTCGAAGC CAAAAAAGTA CCCGGCCTAT ACTTTATAGG CGAAGTGCTG
GATGTCACTG GGTGGCTGGG CGGTTTTAAT TTCCAATGGG CGTGGGCGAG TGGGTATTGT
GCTGCGCAGC ATGTTTAG
|
|---|
| Protein sequence | MKDLDCIVIG GGAAGLMCAA TAGQRGKSVA VLDHANKVGK KILMSGGGRC NFTNYFVEPA
NYLSQNPHFC KSALSRYTQY DFIELVSRYN LEYHEKTLGQ LFCDHKAKDI LNILLAECEL
GGVEITTQCS IEKVEQLTGD TDYRFKLHTT MGAYRCKSLV VASGGLSIPT MGATGFGYDL
AKQFGLRITA REASLVPFTF KGELLTLAQS LAGVALPVVI SCNNQSFKEA MLFTHKGISG
PAVLQISNYW YSGNNIEINF LPDIDLAEQI AQWQSEKSKS ELTTLLSRLM PKRFVVAWLA
AEHAKACGAN SIANKNIADL SRSDIEIIAK LFHAWQCMPA GTEGYKTAEV TRGGVNTDDV
SSKTFEAKKV PGLYFIGEVL DVTGWLGGFN FQWAWASGYC AAQHV
|
|---|
| |