| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1634 |
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| Symbol | |
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| ID | 3965189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2097666 |
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| End bp | 2098292 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637920717 |
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| Product | thymidylate kinase |
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| Protein accession | YP_527108 |
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| Protein GI | 90021281 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.60217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCTA CTGGAAAATT TATTACCGTT GAAGGCACAG AAGGTGTCGG TAAATCGACA
AATATCGAGC TTATAAAAAC ACTGCTTCAG CAAGCGGGTA TAGAGCTTGT AGTAACCCGC
GAGCCTGGCG GAACACCACT GGCGGAAGAG TTGCGCAATG TACTGTTGGC TAATAGAGAC
GAAAACTTCG ACCCCTTGGC CGAGTTGCTA GTGGTATTTG CCGCGCGAGC ACAGCATATA
AACCAAGTAA TAAAACCTGC GTTAGCCGCC GGTAAATGGG TGTTAAGCGA TAGATTTACC
GATGCGACTT TTGCCTATCA AGGCAAGGGG CGTGGCTTAC CTATACAGGC TATATTGCAG
TTAGAGCAAA TGGTACAGCA GGGCTTGCAG CCAGATGCGA CTTTTTTGTT AGATATAGAT
GTGCAGGTTG GCCTTGAGCG CGCCCGTGAG CGCGGCGAGC TAGATCGATT TGAAAACGAG
CATATAACTT TTTTCGAAAA AGTACGTGCC GGTTACCACG AGCGAGTTGC CGCTACGCCA
GAAAGGTTTA TGGTAATTAA TGCCGGCCAA TCATTAGAAG CTGTACAACA AGATGTAACG
CTCGCGGTAG AAAAGCTTCT CGCCTAA
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| Protein sequence | MISTGKFITV EGTEGVGKST NIELIKTLLQ QAGIELVVTR EPGGTPLAEE LRNVLLANRD
ENFDPLAELL VVFAARAQHI NQVIKPALAA GKWVLSDRFT DATFAYQGKG RGLPIQAILQ
LEQMVQQGLQ PDATFLLDID VQVGLERARE RGELDRFENE HITFFEKVRA GYHERVAATP
ERFMVINAGQ SLEAVQQDVT LAVEKLLA
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