| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1632 |
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| Symbol | |
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| ID | 3965187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2095722 |
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| End bp | 2096591 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920715 |
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| Product | aminodeoxychorismate lyase apoprotein |
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| Protein accession | YP_527106 |
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| Protein GI | 90021279 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.114958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCGAAC CTGTTGTCTC ACTTGTTAAT GGTGTTAAAA CCCAACAAAT CGACATTCAA
AATAGAGGAA TGGCGTTTGG CGATGGGGTG TTCGAAACAA TGCGCCTTAC TCAAGGCCAC
ATTCCTCTAC TAGACCTTCA TAAAGCAAGG CTGCACGTCG GTATTAAAAC GCTCGGCTTA
AACTACAGTG AAGCGGCTTT AAATAAACAC CTCGCACAGC TGTTTAGTAT TATTAACGAC
TCTAATATTG CATCCGGTCG CGTTAAGCTT ATTGTAGCCA GGGGCCAAGG GGGCCAAGGG
GGCCAAGGGG GCCAAGGGGG GCAGGGGGTT AACCCTTCGC CTGATGCAGG CGTAGATGTA
AGTATTCTTT TGTACGCCAG CCAATTAGCC GCTTGGGTGC AGCCAGCGGT TGCGCTAAAA
ACCAGCAGAG TACAGTTACC CCATAATGTA AACCTAGCCG GTATAAAGCA CCTTAACCGA
TTGGATTACG TACTAGCGGC ACAAGCTGCA ATGCCCGCCG AAAATGAGCA GGTATTATTG
CTAGATGTTG CAAATAACTT AATAGAAACC GTACATCACA ATGTGTTTTT TATTCGCGGT
AGCGAAGTGA TTACACCATC GCTTGCTCGT TGCGGTGTAA ACGGCGTGTT TAAGCAGTGG
TTAGTGAATT CGGTAATTCC AAAAGCGGGG CTGCAATTAG TCGAGCGCGA AATTAGCCGA
GTAGATGCAG AAGCTTGCGA CGCGTGCTTT ATTACCAACG CTTACTCGGG GTTAACACCT
GTAACAGCAA TAAATGGGCA CCTATTTAAT AGCTGTGAAA AATTAAACGC TATAACTGGC
GAAATTAACC AAATATTGGG TGATAAATAA
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| Protein sequence | MLEPVVSLVN GVKTQQIDIQ NRGMAFGDGV FETMRLTQGH IPLLDLHKAR LHVGIKTLGL
NYSEAALNKH LAQLFSIIND SNIASGRVKL IVARGQGGQG GQGGQGGQGV NPSPDAGVDV
SILLYASQLA AWVQPAVALK TSRVQLPHNV NLAGIKHLNR LDYVLAAQAA MPAENEQVLL
LDVANNLIET VHHNVFFIRG SEVITPSLAR CGVNGVFKQW LVNSVIPKAG LQLVEREISR
VDAEACDACF ITNAYSGLTP VTAINGHLFN SCEKLNAITG EINQILGDK
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