| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1629 |
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| Symbol | |
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| ID | 3965184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2092884 |
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| End bp | 2093627 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920712 |
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| Product | 3-oxoacyl-[acyl-carrier-protein] reductase |
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| Protein accession | YP_527103 |
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| Protein GI | 90021276 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000000722378 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTCG AAAATAAGGT AGCCATCGTA ACGGGTGCAA GCCGCGGTAT TGGTGAGGCT
ATTGCAACTG CATTGGCAGA AGCTGGTGCT ACTGTTATTG GTACAGCTAC ATCTGATGCT
GGCGCGGCTA AAATTACTGC GCGTATCGCT GAGGCGGGCC ACAAGGGCGA GGGCATGACC
CTTAACGTAT CAGATGCTGA TTCAGTAGCC GCTGTGATTA AAGCTGTTAC AGACAAATAT
GGCGCTGCTC AAATTCTTGT TAACAATGCA GGTATCACTA AAGATAACCT ATTAATGCGT
ATGAGCGATG AAGAGTGGTT TGACGTGGTT AACACCAACT TAAGCGCCAT ATTCCGCATG
AGTAAGGGTT GTTTGCGCGG CATGATGAAA GCGCGCTGGG GCCGTATTGT TAATATCAGC
TCGATTGTTG GTCAAATGGG TAATGCTGGT CAAACCAACT ACTCTGCAAC CAAAGCGGGC
GTAATGGGTT TTGCTCGCTC TTTGGCCAAA GAAGTGGGTT CACGTAACAT TACAGTAAAC
AGCGTTTCGC CAGGTTTTAT CGATACGGAT ATGACCAAAG TACTGCCAGA AGAACAAAAA
CAAGCCATGC AAACAGCCAT TGCTTTGGGG CGTTTGGGGC AGCCAGAAGA GATTGCCAAG
GTTGTAAAAT TCCTTTGCAG CGAGGATGCA AGCTACATTA CCGGTGAAAA TATTCACGTT
AACGGTGGGA TGTACATGTG CTAA
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| Protein sequence | MSFENKVAIV TGASRGIGEA IATALAEAGA TVIGTATSDA GAAKITARIA EAGHKGEGMT
LNVSDADSVA AVIKAVTDKY GAAQILVNNA GITKDNLLMR MSDEEWFDVV NTNLSAIFRM
SKGCLRGMMK ARWGRIVNIS SIVGQMGNAG QTNYSATKAG VMGFARSLAK EVGSRNITVN
SVSPGFIDTD MTKVLPEEQK QAMQTAIALG RLGQPEEIAK VVKFLCSEDA SYITGENIHV
NGGMYMC
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