| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1627 |
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| Symbol | |
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| ID | 3965182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2090836 |
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| End bp | 2091861 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637920710 |
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| Product | putative glycerol-3-phosphate acyltransferase PlsX |
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| Protein accession | YP_527101 |
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| Protein GI | 90021274 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.323232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCAGAAG AGATTCATCT CTCAGTTGAC GCAATGGGCG GGGATTTTGG TCCCCGTCTT
TGCGTTGAAG CGGCCGCATC TTTTATCGCT AAGCATTCTA ATGTTCGCAT AACATTAGTT
GGCGATAAGG CGGCCGTTTC TTCGTGTATC CCCCCGCAAG CAGATCTATC CCGGCTCCAT
GTACTTCACG CCGATCAAGT TGTTGATATG GCCGATAAGC CCAGCCATGC ACTACGCCAT
AAAAAAAACT CCTCCATGTG GCGCGCACTG CAGCTAGTAG CAGATGGCGA AGCGCAAGCT
TGCGTAAGCG GCGGCAACAC AGGCGCACTA ATGGCAATTG GTTGCCATTT ATTAAAAACC
ATAGCGGGTA TAGATCGCCC TGCAATTGCC AAGCAAATAC CCACCGCCCG CGGTAGTAGC
GTGTTGTTAG ATTTGGGCGC GAATTTAGAG TGCTCGCCGC AACAGCTTTT TCAATTTGGC
CTTATGGGGC AAGGGTTGGC GCGGGTTTAC GGCAAGAGTG AGCCCACCGT AGCGCTGCTA
AATGTGGGGT CTGAGCTTAC CAAGGGTAAT GACATCATTC AGGACACGGC CCAGTTGATG
GGCGACTGCG CAGATATGCA CTTTCGCGGG TTTGTAGAGG GCGATTCTCT CTACAGTGGC
GAAGTAGATG TAGTTGTTTG CGACGGGTTT ATCGGCAATG TAGCGCTAAA AGTAAGCGAA
GGTGTAGCCA AATTTGTTTT TGGTGACTTG CGCAGCAGAA TAGGTCGCGG TGTGCGCTCA
AGGTTGCTTG CCTGGTTGGC AAAGCCCGTT TTAAAGCCGT GGGCAGAGCA GTTTCGACCC
GCCAAATACA ATGGCGCAGC GCTTTTAGGG CTGAAGGGGG TTGTCATCAA AAGCCACGGT
GGGGCAGACG CCGAAGGGTT TGAGCAGGCA TTATATGTCG CTTTGGAGCA GGCGAGCGCC
GGTATTCCAT TAAAAATTCA AGCCAGCTTA GCGGCAATGC TAGGTGCAGG GCTAGAAACT
AAATAA
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| Protein sequence | MSEEIHLSVD AMGGDFGPRL CVEAAASFIA KHSNVRITLV GDKAAVSSCI PPQADLSRLH
VLHADQVVDM ADKPSHALRH KKNSSMWRAL QLVADGEAQA CVSGGNTGAL MAIGCHLLKT
IAGIDRPAIA KQIPTARGSS VLLDLGANLE CSPQQLFQFG LMGQGLARVY GKSEPTVALL
NVGSELTKGN DIIQDTAQLM GDCADMHFRG FVEGDSLYSG EVDVVVCDGF IGNVALKVSE
GVAKFVFGDL RSRIGRGVRS RLLAWLAKPV LKPWAEQFRP AKYNGAALLG LKGVVIKSHG
GADAEGFEQA LYVALEQASA GIPLKIQASL AAMLGAGLET K
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