| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1612 |
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| Symbol | |
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| ID | 3965719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2072736 |
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| End bp | 2074601 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637920694 |
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| Product | peptidase M20D, amidohydrolase |
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| Protein accession | YP_527086 |
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| Protein GI | 90021259 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.137162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.789533 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACAGA ACGTGCGCGA TAATCTTAAA AATAAGGTTG TCTTTGGCAT TGTTGTACTT
GTAATGCTAA TTATGGTTGT AGGCGGTGTA GGTAGCGTCA ACTTAAATAG CATTGGCGGC
AACGATGTTG CATCGGTAGG CGGAGAGGGC GTTAGCGCCG TAGAGCTTGG TCGAGCGGTG
GCAATGCGTA AAGATCAGTT GCTAGCTAAT GGTGTTGATC CAACCTCAGA CTTTGTCAAA
GAGCAAAACC TTAGGCAGCA AATTTTACCT CAGCTAGTAC GCCGTAAAGC GTTGCTGGTA
ACAGCAGAAG AGGCCGGAGT AGGGGCCGCA GTAGCTGAAG TAGAAAAAAC AATTCTAGGT
CAAGAAACAT TTAAAGTGGG TGGCAAATTT GACCCGCAAA CTTATCGTCG ATTAATTGGT
AATGCGGGCT ACTTGCCGGC AACCTATAAA GTGGCAGTGG CTGAAGATAT TATTCTATCG
CATCAATCCT CTGGTTTGGC CGACTCTGCG TTTGTGTCAG ACGAAGAGAT AAATGCGCTA
GTTGCGATTC TTAATCAGAA GCGCAGTTTC TTTGGAATCA CTATACCCAA AGAAACAGTG
GGTGATGAAG TTACTGTAAC CCCAGAGCAA ATTGAAGCTT ACTACCAAGC AAACCAGCAA
GAGTTTAGTG TGCCAGAAAA AGTCTCAGTT GATTATATTG AGATTTCTGT AGCTGAAATT
GCTAAAACAA TTGCAGTTGA TGAAGCCGAT ATTAAAGCTC AGTACGAACA AGAAAAAGCA
GATTTCGTTG AGTCTTCGGA ATATGAAATT GCTCACATTC TAATTGCTGA CGGTGATGAA
AGCGCCAGCA AGATAGAAGA AGTTCAAACC CAATTAGCTG CTGGTGAGGC GTTTGAAACG
CTTGCAGAAA CTTACTCTGA CGATTTTGGT AGTCGTGAAA CTGGTGGTTC ATTGGGTGTA
TTAACAACTG GAATCTTCCC AGAAGAGTTC GAGCAAGCTG TATATGCGCT TGAAGAGGGT
GAGGTTTCTG AACCTGTTAC AACAGACGCT GGTACGCACT TCATTAAAGT TACCAGCAAA
AAAGTTGAAG CACTTGCTAG TTACGAAGAG CGCAAGCCTG AAATAAAGAA AGCTATCCAA
AACTTACGCG CAGAGAGCTT CTATGTCGAT CAGTATGCCG AGCTGGAAGA GCTAACGTTT
AACGCCGGTG ATTTAACTGT CGCAGCAGAT CAGCTGGGTT TAACTGTAAA GCAGTCCCCA
CTGTTTGAGC GCAATTTTGG CAACGGTGTA GCTAAAGAAG TTAAAGTGCG TAATGCAGCG
TTTTCAGAAG ATGTTCTATT AAGCGGTCGT AACAGCCCGG TTATAGAAAT TTCTAACTCT
AAAGCGATGG TGTTGAGAAA GCGTACTCAC AACCCAGAGC ACATTGCTGC ACTAGAGTTA
GTGTCTTCTC AGATTCAGCA AAAGTTACAA GCGCAAGCGG TGCAAGCCAA GCTTGCAGAA
TTGGCTAAAA ATATTCAGTC AGAAATTGCA GCTGGTAAAT CGCCAAAAGA AGTGGCCGAG
AGCCTAGGTT ACGATATTGC TGAGCACGAA TTAGTGAAGC GTATGGATGT AACTGCCGAT
GCACAAATGT TGCGAGCAGT GTTCCAAATG GCTGCTGGTT CCGGAGCTAC TGTTTTTGAA
GATATTGAAG CTCAAGGCGG TAACCGAGTG TTATTAGGTT TAACTGCTGT GCAGCCTGGT
AAGGTTGAGG ATATGACCGA GCAAGAGCGA GCAGCATTGT CGACTCAGTT ATTGCGCGAA
AATGCCAATT TAGAGATAGC CGCTTATGAA GAAGCTGCAA TTTCGAAGGT TAAAGTTAAG
TACTAG
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| Protein sequence | MLQNVRDNLK NKVVFGIVVL VMLIMVVGGV GSVNLNSIGG NDVASVGGEG VSAVELGRAV
AMRKDQLLAN GVDPTSDFVK EQNLRQQILP QLVRRKALLV TAEEAGVGAA VAEVEKTILG
QETFKVGGKF DPQTYRRLIG NAGYLPATYK VAVAEDIILS HQSSGLADSA FVSDEEINAL
VAILNQKRSF FGITIPKETV GDEVTVTPEQ IEAYYQANQQ EFSVPEKVSV DYIEISVAEI
AKTIAVDEAD IKAQYEQEKA DFVESSEYEI AHILIADGDE SASKIEEVQT QLAAGEAFET
LAETYSDDFG SRETGGSLGV LTTGIFPEEF EQAVYALEEG EVSEPVTTDA GTHFIKVTSK
KVEALASYEE RKPEIKKAIQ NLRAESFYVD QYAELEELTF NAGDLTVAAD QLGLTVKQSP
LFERNFGNGV AKEVKVRNAA FSEDVLLSGR NSPVIEISNS KAMVLRKRTH NPEHIAALEL
VSSQIQQKLQ AQAVQAKLAE LAKNIQSEIA AGKSPKEVAE SLGYDIAEHE LVKRMDVTAD
AQMLRAVFQM AAGSGATVFE DIEAQGGNRV LLGLTAVQPG KVEDMTEQER AALSTQLLRE
NANLEIAAYE EAAISKVKVK Y
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