Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1610 |
Symbol | |
ID | 3965717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2069588 |
End bp | 2072005 |
Gene Length | 2418 bp |
Protein Length | 805 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637920692 |
Product | Lon-A peptidase |
Protein accession | YP_527084 |
Protein GI | 90021257 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000614629 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAAT TAGACACAAA TAAACTAGAT CATATCCTCC CTCTACTACC CCTAAGAGAT GTGGTGGTTT ACCCGCACAT GGTTATTCCG CTTTTTGTTG GTAGAGAGAA ATCCATTTCT GCGCTCGAGC ATGCGATGTC TGACGACAAG CAAGTGCTTC TTGTGGCCCA GAAGCACGCA TCTGTGGATG ACCCGTCCAA GGATGACCTG TACGGGCATG GCACCATTGC CACCGTGCTA CAGCTTCTTA AATTGCCCGA TGGCACCGTT AAAGTGCTGG TAGAGGGCAA GCGCCGAGCC ATTATTGATG AGATTCAAGA GTCCGAAAAC TACTTCCAAG CGCAAATACG CCCATTGGTT GCGGATGAAG AGGAAGAGCG TGAAGCTGAA GCGCTCGCTC GTTCGCTGCT TACTCGATTT GAGCAGTATG TGAATATAAG CAAAAAGGTG CCTTCAGAGG TGCTTACATC GCTAAGCGGT ATTGATGAGC CGGGTAGGCT TGCAGATACA GTGGCGGCGC ATATGTCGCT AGATTTGGCT CAGAAGCAAG AAATTTTAGA AATCGCTAGC ACGCAAGAAA GGTTAGAGCA CTTAATAGGC TTGCTCGAAG CTGAAGCGGA CTTATTCCAA GTTGAAAAGC GCATTCGTGG TCGCGTTAAA AAACAAATGG AAAAAAGTCA GCGCGAGTAC TATTTGAATG AGCAAATGAA AGCCATTCAA AAAGAGCTTG GTGACATGGG CGAAGAGGGC AATGAGCTAG AAGAGCTCGA GAAGAAAATT GCCGATTCGG GCATGGGCAA AGATGCGATG GAGAAAACCC ACGCAGAGCT GGCCAAACTA AAAATGATGT CTCCTATGTC AGCCGAAGCA TCGGTGGTGC GTTCGTATAT TGACTGGATG ATTAACCTGC CTTGGAAAAA ACGCAGCAAA GTTAGGCACG ATTTAGAAAT CGCTCAATCA ATACTTGAAT CCGACCACTA CGGTTTGGAA GAAGTAAAAG AGCGAATTCT TGAGTACTTG GCGGTTCAAA AACGCGTTAA GAAAATTAAA GGGCCTATTT TGTGTTTGGT TGGCCCCCCT GGTGTAGGTA AAACGTCGTT GGGCGAATCT ATCGCTCGCG CAACTAACCG TAAATTTGTG CGTATGGCTT TGGGCGGCGT GCGAGATGAA GCCGAAATTC GAGGGCATCG CCGAACTTAC ATAGGTTCTA TGCCTGGCAA GCTTGTACAA AAAATGTCGA AAATTGGGGT GAAGAACCCG CTGTTTTTGC TAGATGAAAT TGACAAAATG GGAATGGATC ATCGCGGTGA TCCAGCATCT GCATTGCTTG AGGTGCTAGA CCCAGAGCAG AACAATAGCT TTAACGACCA CTACTTAGAG GTGGATTACG ATCTATCTGA AGTAATGTTT GTGTGTACGT CAAACACTAT GAATATTCCT GGGCCTTTGT TAGACCGCAT GGAAGTTATT CGTATTCCGG GCTATACCGA AGACGAAAAA ATAAACATCG CTACGCGCTA CCTTATTCCA AAGCAAATCA AAAATAATGG TTTGAAAGAA AATGAGATAG AAATTCAAGA TGAAGCGATT CGCGATGTGG TTCGTTACTA TACTCGCGAA GCGGGTGTGC GTGGCTTAGA TCGTGAAGTT GCAAAACTCT GTCGAAAAGT TGTAACGCAA AATGTTAAAA ATAAAACGCA AGACAAAATA GTTATTACTA GCGATAAGCT AGAAGATTAT TTAGGCGTTA AAAAAGCGGA TTACGGCAAA GCGGAAGACA AAAACCAAGT GGGGCAGGTT ACTGGTTTAG CGTGGACCCA GGTTGGCGGT GAGCTATTAA CCATCGAGTC TTCTGCTGTG AAAGGGCGCG GTAGGTTAGT TAAAACCGGC TCACTGGGCG ATGTTATGCA AGAGTCTATT CAGGCTGCGA TGACCGTTGT GCGTTCGCGC TCCAAGTTTT TAGGCATTGC ACCAGATATT CACGAGAAGC GAGATTTGCA TATTCACGTC CCAGAAGGTG CGACACCTAA AGATGGGCCT AGTGCGGGTA TTGCAATGTG TACCGCATTG GTGTCTGTTT ATACCGATAT TCCGGTGCGA GCGGATGTGG CCATGACCGG TGAAATTACG CTACGTGGTG AGGTGTTAAA AATTGGTGGG CTAAAAGAAA AATTGTTAGC CGCACACCGA GGGGGCATTA AAACGGTCAT TATTCCGCAT GAGAATGAGG CCGATTTGAG AGAAATTCCC GATAATATAA AGGCAGACCT ATCGATAAAG CCTGTACAAT GGATAGATCA GGTCCTTGAA ATTGCGTTGC AATACATGCC AAAACCCTTC AGTGATGAAG AATATGAGGC GCTCGAAACC AAAGCCCAGA AGGAAGGTGA AGAGCAGAGC AGGATAAGCA CGCACTAA
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Protein sequence | MDQLDTNKLD HILPLLPLRD VVVYPHMVIP LFVGREKSIS ALEHAMSDDK QVLLVAQKHA SVDDPSKDDL YGHGTIATVL QLLKLPDGTV KVLVEGKRRA IIDEIQESEN YFQAQIRPLV ADEEEEREAE ALARSLLTRF EQYVNISKKV PSEVLTSLSG IDEPGRLADT VAAHMSLDLA QKQEILEIAS TQERLEHLIG LLEAEADLFQ VEKRIRGRVK KQMEKSQREY YLNEQMKAIQ KELGDMGEEG NELEELEKKI ADSGMGKDAM EKTHAELAKL KMMSPMSAEA SVVRSYIDWM INLPWKKRSK VRHDLEIAQS ILESDHYGLE EVKERILEYL AVQKRVKKIK GPILCLVGPP GVGKTSLGES IARATNRKFV RMALGGVRDE AEIRGHRRTY IGSMPGKLVQ KMSKIGVKNP LFLLDEIDKM GMDHRGDPAS ALLEVLDPEQ NNSFNDHYLE VDYDLSEVMF VCTSNTMNIP GPLLDRMEVI RIPGYTEDEK INIATRYLIP KQIKNNGLKE NEIEIQDEAI RDVVRYYTRE AGVRGLDREV AKLCRKVVTQ NVKNKTQDKI VITSDKLEDY LGVKKADYGK AEDKNQVGQV TGLAWTQVGG ELLTIESSAV KGRGRLVKTG SLGDVMQESI QAAMTVVRSR SKFLGIAPDI HEKRDLHIHV PEGATPKDGP SAGIAMCTAL VSVYTDIPVR ADVAMTGEIT LRGEVLKIGG LKEKLLAAHR GGIKTVIIPH ENEADLREIP DNIKADLSIK PVQWIDQVLE IALQYMPKPF SDEEYEALET KAQKEGEEQS RISTH
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