| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1608 |
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| Symbol | clpP |
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| ID | 3965715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2067298 |
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| End bp | 2067936 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920690 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_527082 |
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| Protein GI | 90021255 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000000191797 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAATA TAGATTTGTC TGCCAGTTCG AATTTGAATG TTGAAAATAC TTTAGTGCCA
ATGGTTGTAG AGCAAACTGC ACGTGGCGAA CGCTCTTACG ATATTTATTC CAGGTTGTTA
AAAGAGCGTG TGATTTTTTT GGTCGGGCAG GTAGAAGATC ATATGGCCAA CTTGGTTGTA
GCGCAGATGC TCTTCCTTGA GGCAGAAAAC CCAGATAAAG ATATCCATTT ATATATCAAT
TCACCTGGTG GCTCAGTAAC AGCAGGCTTG TCTATTTACG ACACCATGCA GTTTATCAAG
CCCGATGTGA GCACTATGTG TATTGGTCAA GCGTGCAGCA TGGGGGCATT TTTGCTAACT
GCTGGCGCTA AAGGTAAGCG ATTCTGTTTG CCAAATGCTC GCACTATGAT TCACCAGCCT
TCAGGTGGTG CACAGGGGCA GGCGAGCGAT ATTCATATTC AAGCGCAAGA AATCTTAAAG
CTAAGAGAGC GTTTGAACGA AATTATGGCT GGACATACTG GTCGTGGCGT AGAAGAGATA
GCGCGCGACA CAGAGCGCGA CCGCTTTATG AGTGCGCACG AATCTGTAGA GTACGGCCTT
ATTGATAAGG TATTAGAGCG TCGAGTTGGT GGTGAGTAA
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| Protein sequence | MSNIDLSASS NLNVENTLVP MVVEQTARGE RSYDIYSRLL KERVIFLVGQ VEDHMANLVV
AQMLFLEAEN PDKDIHLYIN SPGGSVTAGL SIYDTMQFIK PDVSTMCIGQ ACSMGAFLLT
AGAKGKRFCL PNARTMIHQP SGGAQGQASD IHIQAQEILK LRERLNEIMA GHTGRGVEEI
ARDTERDRFM SAHESVEYGL IDKVLERRVG GE
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