| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1607 |
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| Symbol | tig |
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| ID | 3965713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2065583 |
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| End bp | 2066917 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920688 |
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| Product | trigger factor |
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| Protein accession | YP_527081 |
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| Protein GI | 90021254 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000266404 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTTT CCCTAGAAAC TACTACCGGT TTGGAGCGCA AGCTAACTGT TGGCATTCCA
GCAAGTGTTG TTGATCAAGA AGTCGCTAAA CGACTCAAGG AAGCCGCTAA AACGGTTCGT
ATCAACGGTT TCCGTAAAGG CAAAGTGCCA ATGAGCGTTG TTCAGCAGCG TTACGGAGCA
GGCGTTCGTC AAGAAGTGCT TGGCGATGCT ATTAATCGTT CATTTTACGA TGCAGTACGC
AAAGAATCTT TGCGTCCTGC AGGTCAGCCG GCTATTGAGC CAAAGCAGCT TGAGCCAGGC
AAAGACATTG AGTTTGTAGC TACTTTCGAA GTGTACCCAG AAATCGAAGT TTCTGGCTTA
GAGTCAATCG AAGTTACTCG CTACAACGCA GAAGTTACCG ATGCAGACGT AGATACCATG
ATCGAGACTC TGCAAAAGAG TCAGGCTGAT TGGGCGCCAG TTAAGCGCAA ATCTAAAAAA
GGCGATCGCG TAGTTATCGA CTTTAAAGGC ACCAAAGATG GCGAAGCCTT CGAAGGTGGC
ACTGCTGAAG GTCAAACCCT TGTATTGGGT TCAAACTCTA TGATTCCTGG GTTTGAAAAA
GGCATTATTG GCATGAAAGC TGGCGAAACA GAAACCATCA AGGTGACTTT CCCAGATGAT
TACCAAGAAG AATCTCTACG CGGCGCAGAA GCCGAGTTTG AGGTTACTGT GCAAAAAGTT
GAAGGTCAGA AGCTTCCTAA GCTTGATGAC GAGTTCTTTG CTAAGTTTGG CGTAACTGAA
GGCGGCGAAG AAAAATTCCG TGCAGATGTT CGTGAGAACA TGGAGCGCGA AAAGCAAAAG
GCACTTAAAG GTAAGCTAAA AGAGCAAGTG ATGAATGGCT TGGTTGCAGC AAATACCGTA
GACATTCCAA AGTCGCTTGT TTCTGGTGAG ATCGATGCGT TGCGCAATCA AATGGGCAAC
CAAATGATGC AGCAATACGG TTCTCAGGCT GAAGGTATCG ACTTTAAGTC AATCTTGCCA
GACGATATGT TTAAAGAGCA GGCAGAGCGT CGCGTTGCTT TGGGTTTGAT TGTTTCTGAG
ATTGTTAAAA ATGAAAAAAT CTCAGTAGAT AAAGAACTTG TTAAATCGTT GATTGAAGAT
GTTGCATCTA CTTACGAGCA CCCTGAAGAA GTTGTAAATT ACTACTACGG TAATGAGCAG
TTGTTGGGTG GTGTTGAGGC TGCAGCTTTA GAAGAGCAGG TTGTAAGCTT GGTGCTCTCT
AAGGCAAAAG TAAGCGACGA AACAATTAGC TATGAAGAAG CTGTTAAGCC TGCTGCAAAA
CAAGCTGAAG AATAA
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| Protein sequence | MQVSLETTTG LERKLTVGIP ASVVDQEVAK RLKEAAKTVR INGFRKGKVP MSVVQQRYGA
GVRQEVLGDA INRSFYDAVR KESLRPAGQP AIEPKQLEPG KDIEFVATFE VYPEIEVSGL
ESIEVTRYNA EVTDADVDTM IETLQKSQAD WAPVKRKSKK GDRVVIDFKG TKDGEAFEGG
TAEGQTLVLG SNSMIPGFEK GIIGMKAGET ETIKVTFPDD YQEESLRGAE AEFEVTVQKV
EGQKLPKLDD EFFAKFGVTE GGEEKFRADV RENMEREKQK ALKGKLKEQV MNGLVAANTV
DIPKSLVSGE IDALRNQMGN QMMQQYGSQA EGIDFKSILP DDMFKEQAER RVALGLIVSE
IVKNEKISVD KELVKSLIED VASTYEHPEE VVNYYYGNEQ LLGGVEAAAL EEQVVSLVLS
KAKVSDETIS YEEAVKPAAK QAEE
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