| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1601 |
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| Symbol | |
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| ID | 3965668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2057167 |
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| End bp | 2057814 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637920682 |
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| Product | thymidylate kinase |
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| Protein accession | YP_527075 |
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| Protein GI | 90021248 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0530437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAATAACT TTACTTGCCC TTTGTGCCAA ACCACTCAAG CTACTCTGTT TTACACGGAT
AAACGCAGGT CGTATTACCA GTGCGGGTGC TGCCAATTAG TGTTTGTTCC CAGCCAGTAT
TGGTTGAGCG CTAAAAGTGA AAAACAAGAA TACGATAAAC ATATAAATAC CCCAGAAGAT
ACTGGTTATA GAACGTTTTT AAACCGTATT TTTACGCCTG TTTTAGCTCG TTTACCAGCT
AAAGCCAAGG GGTTAGATTT CGGCTGCGGC CCAGGGCCAA CCCTATCGGT TATGTTTGAA
GAGCAGGGCG CGCAGGTAAG CTTGTTTGAT AAATTTTATT ACCCAGATGA TGCCGTGCTA
GCAAAGCAGT ATGACTTTGT AACTGCAACC GAGGTGTGGG AGCATCTGTC TGATCCGCGC
TTAGATTTGG AATTGCTATG GCAATGCGTA AAGCCGGGTG GCGTGCTGGG CGTAATGACT
AAACTTGTGC GCGATGCCGA AGCTTTTAAA GGTTGGCATT ATAAAAATGA TCCAACCCAC
ATAATCTTTT TTTCTCTCGC TACTTTGCGC TATTTGGAGA AAAAGTGGGG GGCGATATTA
GAAGTAGTAG CTGCAGATTC CTTTATATTT ACTAAGCCTA GTAATTAG
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| Protein sequence | MNNFTCPLCQ TTQATLFYTD KRRSYYQCGC CQLVFVPSQY WLSAKSEKQE YDKHINTPED
TGYRTFLNRI FTPVLARLPA KAKGLDFGCG PGPTLSVMFE EQGAQVSLFD KFYYPDDAVL
AKQYDFVTAT EVWEHLSDPR LDLELLWQCV KPGGVLGVMT KLVRDAEAFK GWHYKNDPTH
IIFFSLATLR YLEKKWGAIL EVVAADSFIF TKPSN
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