| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1596 |
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| Symbol | |
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| ID | 3965663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2051202 |
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| End bp | 2052365 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637920677 |
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| Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
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| Protein accession | YP_527070 |
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| Protein GI | 90021243 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01047] carboxynorspermidine decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00157002 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACAAG CAAAATTCAC TTTAGACGTA ACACGGGTAC CCAGCCCGTG CTACGTTGTT
GATAAAGCCA AGTTAGAGCA AAACCTGCGC ATTCTCGATT ACGTGCAGCA GCAAAGCGGC
GCCAAAGTGC TGCTCGCTTT AAAAGCATTT TCTATGTTTT CGCTCGCCCC GTTAGTAATG
AAATATTTAA ATGGTGTGTG CGCCAGCGGC TTAAACGAAG CAAAACTCGG CCGCGAAGAA
TTTGGCAAAG AAGTGCATAC ATACTCCGCA GCATTTCGCC CGCAGGAATT TGAAGAAATT
TTGGCGGTAA GCGACCACCT TGTATTTAAC TCATTTAACC AATGGGAAAC ATACAAAGCG
CGCTGCCTAG CCGCACAGCA AGATCGCCCT CACCTAGAGT TTGGCCTGCG CATAAACCCA
GAACATTCCG AAGGTGAAAC CCCCATGTAT GACCCGTGCG CGCCTTGTTC ACGTATGGGT
ATACCTATCA AACAATTCGC CAACAAAGAT CTTCACGGCA TAAGTGGCTT GCACTTCCAC
ACCTTGTGCG AGCAAGATTT CGCGCCTTTG GCACGCACAC TCGACGCCGT GGAAGAAAAG
TTTGGCGATA TATTACCCTC ACTAAAATGG GTGAATTTTG GTGGTGGCCA TCATATTACC
CGTGCAGACT ACCAAGTAGA TGCTCTAATT GAGCGCCTAA ATGCATTCCA AACCAAATAC
GACGTGCAAG TGTACCTAGA GCCCGGCGAA GCTATTGCGC TTAACGCGGG TGTATTTGTA
AGCGAAGTAC TAGACACGCT TAATAACGGT ATGGACATAG CCATTTTGGA TGCCTCTGCC
ACTTGCCATA TGCCCGATGT GATTGAAATG CCCTACCGCC CACGCATTAC CGGTGCAGGT
GAACCCGGCG AGCGCAATCA CACCTACCGG TTGGGTGGCC CTAGCTGCTT AGCAGGCGAT
GTAATTGGCG ACTACAGCTT TAGTAACCCG CTGCAAATTG GCGACCGAAT GACCTTTGAA
GACATGGCTA TATACACCAT GGTAAAAAAC ACCACCTTCA ACGGCATCAA CCTGCCATCT
ATTTGTGTGT GGGATTCGAC CACCGACGAG CTGGAAGTGA TTAAAAACTT CGGCTATGAG
GATTTTAAAC AACGTTTGTC CTAA
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| Protein sequence | MTQAKFTLDV TRVPSPCYVV DKAKLEQNLR ILDYVQQQSG AKVLLALKAF SMFSLAPLVM
KYLNGVCASG LNEAKLGREE FGKEVHTYSA AFRPQEFEEI LAVSDHLVFN SFNQWETYKA
RCLAAQQDRP HLEFGLRINP EHSEGETPMY DPCAPCSRMG IPIKQFANKD LHGISGLHFH
TLCEQDFAPL ARTLDAVEEK FGDILPSLKW VNFGGGHHIT RADYQVDALI ERLNAFQTKY
DVQVYLEPGE AIALNAGVFV SEVLDTLNNG MDIAILDASA TCHMPDVIEM PYRPRITGAG
EPGERNHTYR LGGPSCLAGD VIGDYSFSNP LQIGDRMTFE DMAIYTMVKN TTFNGINLPS
ICVWDSTTDE LEVIKNFGYE DFKQRLS
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