| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1586 |
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| Symbol | |
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| ID | 3965653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2036809 |
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| End bp | 2038956 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637920667 |
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| Product | ribonuclease E and G |
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| Protein accession | YP_527060 |
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| Protein GI | 90021233 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTATTC GCGCCATTAA GGGTTTGGCT AAATCTATAA AGAATAAAAA GCGAACAATA
ATTCGCAGTA TTGTCGCGGT TTGGTTGGTG TTATTCATTG CTTTACTGGG CGGTAAGGCA
TATCAGCACT TAGATCAACA CGAGTCTCGG GGCGCCATTG CCGTAGAAAA TGGCCATTTT
GGTGAAAGTT ACCCCACACC TATTTATTTA GATCAAGGCT GGGATCGCTC AGATAGCCTT
TGGTTTTACA ATACCACGCA GGGCTCGGCG TTATTGCCAT ACGACTTCTT TTTAGAGTTA
GAGTTACCAG CAGTGGAATC AACAGAAAAA CTGCGCGATA TAGCGACAAT AGATAAGTAT
CGCTATTTAC CTCAGGATGA ATCTTTCTTT AACCCCGATG GTTTACCTCT AGGCTTTGTA
AAAGACACCT ACAAAGGTGA CGATTACGTA GGCTACACCT GTGCTGCGTG CCACACAGGC
CAAGTTAACT ATACCGACGA GAAAACCAAC AAGCGCTACG CGATTCGCAT CGATGGCGGC
CCAGCTATGG CCGATATGGT TGGTTTTTTA ATGGAATTGG AAGCATCTAT GGACGCAACG
CTTAAGAATA CAACTAAGCT CGACCGCTTC GTTGATAATG TACTTAAGCG CAACAATGGT
TATTCCGACC GCGATGACGT AATTAAAGAT TTAGAAAAGT GGACCTTAAC CATGAAGCAG
TACAACATGG TTAACGAGTC GGATGTAGAG TACGGCTACG CGCGACTGGA TGCATTTGGG
CGCATATTTA ACCGTGTTTT ACAGCATGTG TTAAACAAAG AGCAAGCGAA GCGAGCCTTG
TTATTGGCGC ATGATGAAAA CGGCGATCGA ATTTTAACCG AGGCTGAGGT TGAGCTGGTA
TTAAAAGATA TTACCGACCC CACGGTAATT GGTAACGAGC AATTTGCATT GGTGTTGCGC
AACTTAATGT CTACCGAGCC TGGCTACCCA GGGTTGACTA AAGATGAGCT TACTATTTTA
AAAGATGTGT TCTTCAATAT ACCTAACGCA CCTGTTAGCT ACCCGTTTAT GTGGGACATT
ACTCATTCCG ATTATGTACA GTGGAATGGT TTAGCGAATA ACGCATCGGT TGGGCCATTA
GGTCGTAACG TGGGTGAAGT GATTGGTGTA TTTGGTATTC TCGATTGGAA AGCCAAAGAC
CCGGGTTTTA GTATTTCGGC TAAGTTATCT GGCCAGAGCA AAAACAAACC TCAGATTGAC
TTTCAATCTT CTATTCGCCA TACCAATTTG CGTCGTTTAG AAAATCAATT GAAAACGTTG
AAGTCACCTG AGTGGCCGGT TGAAATTTTT GGCGAGTTGG ATGAAAAAAA GGTTAAGCGT
GGCGAATTAA TTTACGCCGA GTATTGCCAG TCTTGTCACG AAATTATTGA TAGAAATAAT
TGGGACCGTA TTGTTATTGC CAATATGTCT AACCTCGATA GCGTAGGTAC AGACCGTAAA
ATGGCCGAGA ACAGTGTTAA CTACACGGGT AAATCGGGTA ACTTTAAGTA CACTTATCAA
GCTACCGATG CGGGTACCAT AGTGCTTGGT GAAGAAGCGC CGGTAGCGGC GTTACTGACT
GCAGCTACTA AAGGTGTAGT GGGTACACCA GAGGCCGACA AGTTATTTAT TCGCCGTTGG
TTAGATTGGT TGTATAACTT AGCTAGCTCA TTTTTTGAAA ATGAAATTAA AGCAAGCGTA
AAAGCTGGAG ACTACTTCCC AGATACAACC GGTAAGCCTT ATGATTCATT GCTTGCATAT
AAGGCGCGCT CTTTGAATGG TATTTGGGCT ACCGCACCCT ACTTACATAA TGGCTCGGTA
CCTAGCTTGT ACGATTTGCT GTTGCCGGCA AAGTGCGACC CGGAAAATGG TGTTATGGAA
TGTAGACCAG CAACATTTGA AGTGGGCAGC CGAGAATTTG ATAAAGTAAA AGTGGGTTTA
AAATATGAAG GCTACGGCGG TACCGTATTT GATACCAGTG TTGAGGGTAA CTTCAATACT
GGCCACGAAT ATGCCGCGGG TAATACTGCA CTGCCTAATG GCGAGGAGCT TAAGCCGTTG
AATAAACAGC AGCGTTACGA CTTGTTAGAA TTTATGAAAA CACTTTAA
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| Protein sequence | MIIRAIKGLA KSIKNKKRTI IRSIVAVWLV LFIALLGGKA YQHLDQHESR GAIAVENGHF
GESYPTPIYL DQGWDRSDSL WFYNTTQGSA LLPYDFFLEL ELPAVESTEK LRDIATIDKY
RYLPQDESFF NPDGLPLGFV KDTYKGDDYV GYTCAACHTG QVNYTDEKTN KRYAIRIDGG
PAMADMVGFL MELEASMDAT LKNTTKLDRF VDNVLKRNNG YSDRDDVIKD LEKWTLTMKQ
YNMVNESDVE YGYARLDAFG RIFNRVLQHV LNKEQAKRAL LLAHDENGDR ILTEAEVELV
LKDITDPTVI GNEQFALVLR NLMSTEPGYP GLTKDELTIL KDVFFNIPNA PVSYPFMWDI
THSDYVQWNG LANNASVGPL GRNVGEVIGV FGILDWKAKD PGFSISAKLS GQSKNKPQID
FQSSIRHTNL RRLENQLKTL KSPEWPVEIF GELDEKKVKR GELIYAEYCQ SCHEIIDRNN
WDRIVIANMS NLDSVGTDRK MAENSVNYTG KSGNFKYTYQ ATDAGTIVLG EEAPVAALLT
AATKGVVGTP EADKLFIRRW LDWLYNLASS FFENEIKASV KAGDYFPDTT GKPYDSLLAY
KARSLNGIWA TAPYLHNGSV PSLYDLLLPA KCDPENGVME CRPATFEVGS REFDKVKVGL
KYEGYGGTVF DTSVEGNFNT GHEYAAGNTA LPNGEELKPL NKQQRYDLLE FMKTL
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