Gene Sde_1581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1581 
SymbolpheS 
ID3965111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2030703 
End bp2031716 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content47% 
IMG OID637920661 
Productphenylalanyl-tRNA synthetase subunit alpha 
Protein accessionYP_527055 
Protein GI90021228 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACC TCAAAGCGCT TACAGAGCAA GCTTTAGCAG AAGTAGCAAA AACTGAAGAC 
CTTGCTGGTT TGGACGCTAT TCGCGTTAAT TATTTAGGCA AAAAAGGCGA AATTACTGCG
CAGCTAAAAA ACTTGGGTGG CCTATCCCCA GAAGAGCGCC CAGCCGCCGG AGCAAAAATT
AACGAAGCGA AGCAACTTGT TCAAAACCAC ATTAGCGAAA GAAAAGCAGC GCTAGAGGCG
CAAGCTATAT CGGCTAAGTT AGCAGCTGAA TCCATTGATG TAACCTTAGC GGGCAGGCAG
CCAGAAGTAG GTGGTTTGCA CCCAGTCACG CGTACTTTGC GCCGTATATC TGAAATATTT
ACCGCCGTTG GTTACGATGT AGCCGAAGGC CCCGAAATCG AAGACGATTT CCACAATTTT
GAAGCCTTGA ATATACCTGG GCATCACCCC GCACGTGCAA TGCACGACAC ATTCTATATT
TCGCCCAGCC ATGTATTGCG TACCCATACT TCGCCGGTGC AAGTAAGAAC AATGAAATCG
CAAGAGCCGC CAATTAAAGT TATTTGCCCT GGCCGCGTTT ACCGTTGCGA TTCCGATTTA
ACCCATACGC CTATGTTCCA TCAGGTAGAG GGCTTGGTAG TAGATAAAAA CGTTAGCTTT
GCCGATTTAA AGGGCACCGT GGATCAGTTT TTAAAATCCT TTTTCGAAGC CGATGTACCG
GTTCGTTTCC GCCCGTCTTA CTTCCCATTT ACAGAGCCTT CTGCAGAAGT AGATATTCAG
TGCACAAACT GTGGTGGCGA AGGTTGCAGA ATTTGTAAGC AAACAGGCTG GTTAGAAATT
ATGGGTTGCG GCATGGTGCA CCCCAAAGTT TTTGAAAGCT GTGGCGTAGA TGCAGAAGAA
TACACCGGCC TTGCCTTTGG TATTGGCGTA GAGCGTTTAG CGATGTTGCG CTATGGCGTA
AACGACTTAC GTTTATTCTT TGAAAACGAC CTCGACTTTT TAAATCAGTT TTAG
 
Protein sequence
MENLKALTEQ ALAEVAKTED LAGLDAIRVN YLGKKGEITA QLKNLGGLSP EERPAAGAKI 
NEAKQLVQNH ISERKAALEA QAISAKLAAE SIDVTLAGRQ PEVGGLHPVT RTLRRISEIF
TAVGYDVAEG PEIEDDFHNF EALNIPGHHP ARAMHDTFYI SPSHVLRTHT SPVQVRTMKS
QEPPIKVICP GRVYRCDSDL THTPMFHQVE GLVVDKNVSF ADLKGTVDQF LKSFFEADVP
VRFRPSYFPF TEPSAEVDIQ CTNCGGEGCR ICKQTGWLEI MGCGMVHPKV FESCGVDAEE
YTGLAFGIGV ERLAMLRYGV NDLRLFFEND LDFLNQF