| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1580 |
|---|
| Symbol | rplT |
|---|
| ID | 3965110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 2030160 |
|---|
| End bp | 2030519 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637920660 |
|---|
| Product | 50S ribosomal protein L20 |
|---|
| Protein accession | YP_527054 |
|---|
| Protein GI | 90021227 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0292] Ribosomal protein L20 |
|---|
| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGTG TAAAACGTGG AGTCGTGGCG CGTCGTCGTC ACAAGAAAGT ATTAAAAGCT
GCAAAAGGTT ACTACGGCGC GCGTTCACGC GTATTTCGTG TAGCTAAACA AGCCGTCATT
AAAGCGGGTC AATACGCTTA TCGCGACCGT CGCGTTAAAA AGCGTAACTT CCGTGCATTG
TGGATTACGC GTATCAACGC GCAATCTCGT GCTGAAGGCT TAAGTTATAG CCGTCTAATC
GCTGGTTTGA AAAAGGCAAG CATTGCCCTT GATCGCCGCG TACTTGCAGA TTTGGCCATT
CACGATAAAA CAGCATTTGC TGCTATCGTT GCCAAAGCTC AAGAGGCTCT AGCTGCTTAA
|
|---|
| Protein sequence | MARVKRGVVA RRRHKKVLKA AKGYYGARSR VFRVAKQAVI KAGQYAYRDR RVKKRNFRAL
WITRINAQSR AEGLSYSRLI AGLKKASIAL DRRVLADLAI HDKTAFAAIV AKAQEALAA
|
|---|
| |