| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1577 |
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| Symbol | thrS |
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| ID | 3965107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2027077 |
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| End bp | 2028987 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920657 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_527051 |
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| Protein GI | 90021224 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.219126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTTA TTACTCTTCC CGATGGTTCC AAACGCGAAT ACGATGCCCC CATTTCTGTT
ATGGGTGTGG CTGCAGATAT TGGTCCAGGG TTAGCGAAAG CAACACTTGC CGGTGTTGTT
GACGGAAAAG AAGTGGATGC CTCTTTCGAG ATTACTCAAG ACGTATCACT TTCCATTATT
ACAGCTAAGT CTGAAGAGGG CTTAGAGGTT ATTCGCCATT CGACAGCTCA CTTGTTGGCT
CAGGCTGTTA AACAGCTGTT CCCAGAAGCG CAGGTGACTA TTGGCCCTGT TATCGAAGAT
GGCTTCTATT ACGACTTTGC CTACTCGCGC GCCTTTACGC CAGAAGATTT GGTAGTAATT
GAAGAGAAAA TGAAAGAGTT GGCAAAAGCG GACTTCGACG TTACGCGCCG TGTATTGCCA
CGCGACGAGG CATCGGCTTA CTTCCGCGGT ATAGGTGAAG AGTATAAAGC CCAAATTATC
GACAGTATCC CAGCTAACGA AGAGCTTTCT TTATATAAGC AGGGTGACTT TGAAGATTTA
TGCCGTGGGC CTCATGTGCC TTCAACCGGC AAGCTAGAAT ACTTTAAGTT AATGAAAGTG
GCGGGTGCCT ACTGGCGCGG CGACTCCAAT AACGAAATGC TTACGCGTGT ATATGGCACG
GCGTGGGCAA GCAAAAAAGA TTTAAAAGCT TATGTTCACC GCTTAGAAGA AGCTGAAAAG
CGTGATCATC GTAAGTTAGG TAAAAAATTC GATCTTTTCC ATATTCAAGA AGAAGCGCCG
GGCATGGTGT TTTGGCACCC CAATGGTTGG TCTATTTATA CCGCTATTGA AGAGTATATG
CGTGAAGTGC AGCGCTTGAA TGGCTATGAA GAAATTAAGA CGCCACAGGT TGTAGATCGC
AGTTTGTGGG AGCGCTCTGG TCACTGGGAT AAATTCCGCG ACAATATGTT TACCGTGGAA
TCTGAATCGC GCGATTATGC CGTTAAGCCA ATGAACTGCC CATGTCACGT GCAAGTGTTT
AATCAGGGTT TAAAAAGCTA CCGCGACTTA CCTTTGCGCT TAGCTGAGTT TGGCTGCTGT
CACCGCAACG AAGCGTCGGG CACTTTGCAG GGGTTAATGC GCGTGCGTGG TTTCGTGCAA
GATGACGCCC ATATCTTCTG TTCTGAGTCG ATGATTCAGG ACGAAGTATC AGTATTCACC
GATTTGCTCT TTAAAGTGTA CAAAGATTTT GGCTTCGAAG ACGTGATTAT TCGCCTTTCC
ACACGCCCAG AGCAGCGTGT AGGCAGTGAT GAGGTGTGGG ATAAAGCAGA AAAAGCGCTA
TCAGATGCCT TGGATGCAAA AGGGCTGCCT TGGCAATTAC TGCCAGGCGA GGGCGCCTTT
TATGGGCCTA AAATTGAATT CTCACTAAAA GATTGCCTTG GGCGTGTTTG GCAGTGCGGC
ACCATTCAGG TGGATTTCTC AATGCCGGGC CGTTTAGATG CTCAATTCGT AGCTGAAGAT
GGTTCGCGTC AGGTGCCTGT TATGTTGCAC CGTGCAATCT TGGGTTCATT TGAGCGTTTT
ATCGGAATAT TGATAGAAGA ATACGAAGGG GCATTCCCAG CTTGGCTGGC TCCAACTCAA
GCCGTTTTGC TGAATATTAC CGATAATCAG GCCGAATATG TTAAAAAAGT AGAGAACTCT
TTGAAAAACA AGGGCTTTCG TGTTAATTCC GACTTGAGAA ATGAAAAGAT CGGCTTTAAA
ATCCGCGAGC ACACAATTCA GAAGGTTCCT TACTTACTTG TTGTTGGCGA CCAAGAGGTT
GAAAATAACT CGGTTGCCGT TCGCGGACGA GGTGGTGAAG ACCTCGGCGT AATGACGGTA
GACGCCTTTA CTGCACTTCT TGAAGAGCAA ATTTCCAGTA AAGCGAGATA A
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| Protein sequence | MPVITLPDGS KREYDAPISV MGVAADIGPG LAKATLAGVV DGKEVDASFE ITQDVSLSII
TAKSEEGLEV IRHSTAHLLA QAVKQLFPEA QVTIGPVIED GFYYDFAYSR AFTPEDLVVI
EEKMKELAKA DFDVTRRVLP RDEASAYFRG IGEEYKAQII DSIPANEELS LYKQGDFEDL
CRGPHVPSTG KLEYFKLMKV AGAYWRGDSN NEMLTRVYGT AWASKKDLKA YVHRLEEAEK
RDHRKLGKKF DLFHIQEEAP GMVFWHPNGW SIYTAIEEYM REVQRLNGYE EIKTPQVVDR
SLWERSGHWD KFRDNMFTVE SESRDYAVKP MNCPCHVQVF NQGLKSYRDL PLRLAEFGCC
HRNEASGTLQ GLMRVRGFVQ DDAHIFCSES MIQDEVSVFT DLLFKVYKDF GFEDVIIRLS
TRPEQRVGSD EVWDKAEKAL SDALDAKGLP WQLLPGEGAF YGPKIEFSLK DCLGRVWQCG
TIQVDFSMPG RLDAQFVAED GSRQVPVMLH RAILGSFERF IGILIEEYEG AFPAWLAPTQ
AVLLNITDNQ AEYVKKVENS LKNKGFRVNS DLRNEKIGFK IREHTIQKVP YLLVVGDQEV
ENNSVAVRGR GGEDLGVMTV DAFTALLEEQ ISSKAR
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