Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1566 |
Symbol | |
ID | 3965094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2009849 |
End bp | 2010367 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637920644 |
Product | hypothetical protein |
Protein accession | YP_527040 |
Protein GI | 90021213 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATACAG ATACCTTTGC CATGAAAAAA AGAAACGCAT TAATTGTAAT AGCATTTATT TTGCTAGCGG GATTACAGCT TTCTACCAGT GCAAGAGCCA CCCCTGCACC GGCTTTCACC CTGCCAGAAA TTCATTCTAT GGAGTCGCTC TCCCTTGCGG ACTACCAAGG CAAAGTTATT TATTTAGATT TTTGGGCGAG TTGGTGCGGC CCCTGCAGAA AAAGCCTACC GCTTATGAAC GAAGTGTACA AACGACTCGA AGACAAAGGC TTTATGGTGA TAGCAATTAA TCTGGATGAA AATCGAGAGC TTGGGCTTAA ATTTCTAGAA AACCAGCCGC TCGACTACCC AATAGTGTTT GACAAAACTA AATCTGTACC AGGCAAGTAT CAACTAGAAG CCATGCCAAG CGCCTACCTT ATCGATAAAA AAGGCACCAT TCGCGCTATA CATAAAGGTT TTAAAGAAAA GGACCTAAGC AAAATAGAAA CACAAATTAC CTTTCTGTTG GATGAGTAA
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Protein sequence | MHTDTFAMKK RNALIVIAFI LLAGLQLSTS ARATPAPAFT LPEIHSMESL SLADYQGKVI YLDFWASWCG PCRKSLPLMN EVYKRLEDKG FMVIAINLDE NRELGLKFLE NQPLDYPIVF DKTKSVPGKY QLEAMPSAYL IDKKGTIRAI HKGFKEKDLS KIETQITFLL DE
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