| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1559 |
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| Symbol | |
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| ID | 3965087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2003128 |
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| End bp | 2004723 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637920637 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_527033 |
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| Protein GI | 90021206 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTTCTA CCGCAAATAT CACCATGCAG TTTGGTGCCA AGCCCCTATT CGAAAATATT
TCCGTAAAGT TTGGCGATGG TAATCGCTAT GGCCTAATAG GTGCCAATGG CTGCGGTAAA
TCCACCTTTA TGAAAATATT GGATGGCTCA CTTACCCCTT CGGCTGGCAA CGTTTCTATT
TCCCCCAACG AGCGCGTGGG TAAGTTAAGC CAAGACCAGT TCGCCTTCGA AAAATACTCT
GTAATCGACA CCGTTATTAT GGGCCACTCG GAATTGTGGC GAGTTAAGCA AGAGCGCGAC
CGCATATACG GCTTGCCAGA AATGAGCGAA GAAGATGGCA TGGCCGTGGC CGAGCTAGAA
GTGCAATTTG CCGAAATGGA CGGCTACAGT GCAGAAAGCC GCGCTGGCGA AATATTACTG
GGTGCCGGTA TCGAGCTAGA CCTACACTTC GGCCCAATGA GTGAAGTGGC CCCAGGTTTG
AAACTACGTG TATTGTTGGC GCAGGCGCTA TTTTCTGACC CCGATATATT GCTGCTCGAC
GAACCGACCA ACAACTTGGA TATTAATACC ATTCGCTGGT TAGAAGGCGT ATTGAACCAG
CGCGAAAGCA CCATGATTAT TATTTCGCAC GACCGTCACT TTCTGAACTC TGTGTGTACC
CATATGGCAG ACATCGACTA CGGCGAGTTG CGTGTATACC CAGGCACCTA CGACGACTAC
ATGATGGCTG CCGAGCAAGC GCGCGAGCGA TTACATTCCG AAAACGCCAA GAAAAAAGCC
CAAATTGCCG ACCTGCAGCA GTTTGTGAGC CGCTTCTCTG CCAACGCTTC CAAAGCTAAG
CAGGCCACTT CGCGCGCTAA ACGCTTAGAA AAAATCAAGC TGGATGAAGT AAAAGCCTCG
AGCCGTGTAA GCCCATTTAT TCGCTTTAAG CAAGATAAAA AACTGCACAG ACAAGCCGTT
GTTATTGAAA ACCTTGCGCA CGGGTTTGAA GATAACCCGC TATTTGCCAA AGGTAACTTA
ATTTTAGAGG CCGGTTCACG CTTGGCGGTA ATTGGCGAAA ACGGTGCGGG TAAAACCACC
TTTTTGCGTT GCTTAATGAA CGAGCTAACC CCGCAAAGCG GTAAAATCCA GTGGGCAGAA
AGTGCAACCT TGGGGTACTG CCCGCAAGAT AGCTCCGCGG ATTTTGATAC CGATTTAAAC
CTGTTTGATT GGATGAGCCA GTGGCGTAAG CCCAGCCACG ACGATCAAAT TGTGCGCGCA
ACGCTAGGGC GGCTGTTGTT TTCTGCTGAT GATTTCGCAA AAAAAGTACA GGTGTGTTCC
GGTGGTGAGA AAAACCGACT ATTGTTTGGT AAATTAATGA TGCAAGACAC CAACGTACTG
GTAATGGATG AGCCAACAAA CCACTTAGAT ATGGAATCTA TTGAGGCGCT TAACCTTGCA
CTAGAGCATT ACGACGGCAC CTTGATTTTC GTGAGTCACG ATAGGGAATT TGTATCGTCG
CTGGCTACTC GCGTAATAGA AATAAAAGAT CAGCAGCTGG TGGATTTCCA AGGTACCTAC
GAAGAGTACC TAGCAAGCCA AGAAGCACTG GCGTAA
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| Protein sequence | MISTANITMQ FGAKPLFENI SVKFGDGNRY GLIGANGCGK STFMKILDGS LTPSAGNVSI
SPNERVGKLS QDQFAFEKYS VIDTVIMGHS ELWRVKQERD RIYGLPEMSE EDGMAVAELE
VQFAEMDGYS AESRAGEILL GAGIELDLHF GPMSEVAPGL KLRVLLAQAL FSDPDILLLD
EPTNNLDINT IRWLEGVLNQ RESTMIIISH DRHFLNSVCT HMADIDYGEL RVYPGTYDDY
MMAAEQARER LHSENAKKKA QIADLQQFVS RFSANASKAK QATSRAKRLE KIKLDEVKAS
SRVSPFIRFK QDKKLHRQAV VIENLAHGFE DNPLFAKGNL ILEAGSRLAV IGENGAGKTT
FLRCLMNELT PQSGKIQWAE SATLGYCPQD SSADFDTDLN LFDWMSQWRK PSHDDQIVRA
TLGRLLFSAD DFAKKVQVCS GGEKNRLLFG KLMMQDTNVL VMDEPTNHLD MESIEALNLA
LEHYDGTLIF VSHDREFVSS LATRVIEIKD QQLVDFQGTY EEYLASQEAL A
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