| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1552 |
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| Symbol | |
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| ID | 3965080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1997574 |
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| End bp | 1998080 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920630 |
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| Product | thiol peroxidase (atypical 2-Cys peroxiredoxin) |
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| Protein accession | YP_527026 |
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| Protein GI | 90021199 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2077] Peroxiredoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.108824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGTTAC ACATGGCTAC AGTTACCCTA AAAGGCAATG CATTTAATAC CGTTGGCAAC
CTACCTTCAG CAGGCAGCGC CGCCCCAGAC TTCAAACTTG TTAAAACCGA TTTGAGCGAA
GTATCGCTTG CAGACTTTGC CGGCAAAAAG CTCATCTTGA ACATTTTTCC ATCAGTAGAT
ACCGGCACCT GTGCCACATC CGTACGCACT TTTAACGAAA AAGCAGCAAG CTTAGAAAAC
ACCGCTGTAC TGTGTGTATC TTTAGACTTA CCTTTCGCCC TAGGCCGTTT TTGCGGTGCA
GAAGGCATAG ATAAAGTAGA TTCAGCATCT GGCTTCCGCT CTAGCTTTGG TGCCGATTAC
GGCGTTGCCT TCCAAGACGG TCCTTTGGCT GGCTTGTACT CACGTAGCAT TGTTGTTATC
GACGAAAGCG GCAAAGTAGC TTACGTAGAG CAAGTAGCAG AAACCGTAGA TGAGCCTAAC
TACGAAGCAG CTTTAGCCGC ACTATAA
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| Protein sequence | MELHMATVTL KGNAFNTVGN LPSAGSAAPD FKLVKTDLSE VSLADFAGKK LILNIFPSVD
TGTCATSVRT FNEKAASLEN TAVLCVSLDL PFALGRFCGA EGIDKVDSAS GFRSSFGADY
GVAFQDGPLA GLYSRSIVVI DESGKVAYVE QVAETVDEPN YEAALAAL
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