| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1551 |
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| Symbol | |
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| ID | 3965079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1996707 |
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| End bp | 1997423 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920629 |
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| Product | hypothetical protein |
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| Protein accession | YP_527025 |
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| Protein GI | 90021198 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00373978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAGAG CCTTCCAAAA CCGTAAAGAA TCCATGGCGA AAACCTCGGA TCAGAACGCC
AAGGTTTACA GTAAATACAG CCGTGAAATA TACACGTGTG CCAAATCTGG CGGCGTAGAC
CCAGATGGCA ACTTGAGCTT GCGCAGCCTG CTAGACAGAG CCAAAAAAGA CCAAGTACCC
AGCCACGTTA TTCAAAAAGC CATAGACAAA GCAAAAGGCG GTGGCGGCGA AGACTTTGCT
ACCGCACGCT ACGAGGGCTT TGGCCCAGGC AACTGCATGG TTATTGTGGA TTGCCTAACC
GACAACCCTA ACCGCACCTA CGGCGACGTG CGCACCTGCT TTAACAAGGC TAAAGCCAAA
ATAGGCAGCC AAGGCACGGT AATGCACATG TTCGACCACT GTGCGATTTT TGTGTTTGCC
GGTGACGACG AAGAAGCCAT TTTAGAAGCG TTAATGATGG CCGATGTCGA TGTGACCGAT
ATAGAGTGTG AAGACGGTAA AATTACGGTA TTTACACCCC ACACTGAATA CGGCAAAGCG
AAAACCGCCT TGGCCGAAGT GACCAACGGC GCCGAATTTG AAGTGGACGA AATTCAATTT
GTACCACAAA CCCAAACCGC AATTAGCGGC GACGACATTG AAGTATTCGA AAAATTCTTA
AGTATGCTAG ACGACTTGGA CGATGTGCAA AACGTTTACC ATAACGCTGA ATACTAA
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| Protein sequence | MGRAFQNRKE SMAKTSDQNA KVYSKYSREI YTCAKSGGVD PDGNLSLRSL LDRAKKDQVP
SHVIQKAIDK AKGGGGEDFA TARYEGFGPG NCMVIVDCLT DNPNRTYGDV RTCFNKAKAK
IGSQGTVMHM FDHCAIFVFA GDDEEAILEA LMMADVDVTD IECEDGKITV FTPHTEYGKA
KTALAEVTNG AEFEVDEIQF VPQTQTAISG DDIEVFEKFL SMLDDLDDVQ NVYHNAEY
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