| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1550 |
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| Symbol | |
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| ID | 3965078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1995367 |
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| End bp | 1996518 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637920628 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_527024 |
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| Protein GI | 90021197 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000434853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAAT GGCTAAAGTT TTTATTTATT TGCTCCCTTT GCTTGGGGGC GTGGACGAGC
GTGAACCTTT GGGTGAATCA CGCTGGCCCT AAAAAAGTAC GCCAGTTTAC GGGCGTATTT
GTGCTTGTAT TACTTGTTCC CCCTTTGGTT GGTTATTTGC AGCTGATTAG TGCAGAAATA
CCTGCATTTT TTTCGTTTGT GCGTTCCACG CTTACATGGT GGTATGGGCC GCTTATGTAT
TTTATTGCGC GTGAAATGTT GTTATTACCA AATACACCGC GTGGCATAGC GAACCATATG
TGCGCAGTTT GTGGTTTGTT TGTGGTCACC CAATTATTAA TAAGTAGTGC AATACCCTAT
GGTTATTTCG TTATAGTAAC CGCTGTGGTG GCTGCCTATT GTACGCTTGC GGGCCATACC
TTAGTAAAAA ACGCATCGCG CTTACGCAGG CTTAATAGTA GCTATCGAAA ATCTACTTTT
TATTGGTTGC AATATTTATT GGCAGGCTTG TTATTGCTGT GTGCAATGGA TATAGGTGTG
CTAGTAGCTC TACACTCAAA TGTGCATTTA GACTTTTTAG CGCTCAATAG CATTGCATGC
GTATTTGCTA TTTATGTAAA CGGTATAGTG TTATTTACTC TAATTAAACC CGCGCTTTTT
GAACTAGATG ACGCACAAAC AATTGAACAC GTACAAACCA ATACAGGCGA GCAGCATAAA
ATAAGCGAAG TCGCCGCAGA CGAATCACCA GCAGCCAAGA ATAATGTGCG TTACTTGGAG
TTGAGTGATC AAGTTGCAAC TACGCTAATT AATACCCTTG CAACAATAAT GGAAACTGAT
AAGCCCCACT TAGAGCCAGA CGAAAATTTA ACAAGCATGG CTGGGCGGTT GGGAATAACC
ACGCACATGT TTTCTGAGCT TTTAAACGTA CACTTACATA CCAACTTTTA CGATTGGATG
AATAGCTATC GCTTTAACGC CGCGCTGTTA TTACTGCAAG ATCAAACCGT AAATTACTCC
GTAACCGATA TTGCTTTTCA GGCAGGGTTT AATAATAGGA ATAGTTTTTA CCGTGTGTTC
AAATCGAACT TAGGCATTAC ACCCGCGCAG TATCGCAAAC AGTATAAAGC CGAATTGCAA
AAGCAGGCCT AG
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| Protein sequence | MDEWLKFLFI CSLCLGAWTS VNLWVNHAGP KKVRQFTGVF VLVLLVPPLV GYLQLISAEI
PAFFSFVRST LTWWYGPLMY FIAREMLLLP NTPRGIANHM CAVCGLFVVT QLLISSAIPY
GYFVIVTAVV AAYCTLAGHT LVKNASRLRR LNSSYRKSTF YWLQYLLAGL LLLCAMDIGV
LVALHSNVHL DFLALNSIAC VFAIYVNGIV LFTLIKPALF ELDDAQTIEH VQTNTGEQHK
ISEVAADESP AAKNNVRYLE LSDQVATTLI NTLATIMETD KPHLEPDENL TSMAGRLGIT
THMFSELLNV HLHTNFYDWM NSYRFNAALL LLQDQTVNYS VTDIAFQAGF NNRNSFYRVF
KSNLGITPAQ YRKQYKAELQ KQA
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