Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1545 |
Symbol | |
ID | 3965073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1991234 |
End bp | 1991773 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637920623 |
Product | initiation factor 3 |
Protein accession | YP_527019 |
Protein GI | 90021192 |
COG category | [S] Function unknown |
COG ID | [COG4681] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCTTA ATGCCACAAT ATACAAATTT GCACTTTCTA TTTCGGATTT AAATAGAGAC TTCTATAACT CTATGCAGCT AACGGTTGCA CAGCACCCGT CGGAAAACGC CGAGCGGATG ATGGTGCGTG TGCTGGCTTA TTGTTTAGAG GCCTGCGAGG GATTAGCGTT TACCAAAGGT TTATCAACAC CTGAAACGCC AGATTTATGG GCCAAGAGCT TAGATGACCA AATAAACCTT TGGGTGGAAG TTGGGGAGCC TGCTGCAGAA AAAATTAAAA AAGCTACGCG TTTAGCCAAA AAAGTAAAGG TGTACACCTT TAATAGCAAA TCTGATGTGT GGTGGAGCCA AGAGCAGAAG AAATTAGAGG CGTTAGATGT TTCTGTTGTG CAATTCCCGT GGGACCAAAT TCAAAGCGTC ACCAAGTTAC TTGCTCGCAC TATGACTATG TCGGTTACCA TTACCGGCGA TTCGATATTT GTAAACGCCG ATAATGGTGA TGCAGAAGTT CATTGGCAAA GGCTTCAAAC TACAGAATAA
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Protein sequence | MALNATIYKF ALSISDLNRD FYNSMQLTVA QHPSENAERM MVRVLAYCLE ACEGLAFTKG LSTPETPDLW AKSLDDQINL WVEVGEPAAE KIKKATRLAK KVKVYTFNSK SDVWWSQEQK KLEALDVSVV QFPWDQIQSV TKLLARTMTM SVTITGDSIF VNADNGDAEV HWQRLQTTE
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