Gene Sde_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1545 
Symbol 
ID3965073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1991234 
End bp1991773 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content43% 
IMG OID637920623 
Productinitiation factor 3 
Protein accessionYP_527019 
Protein GI90021192 
COG category[S] Function unknown 
COG ID[COG4681] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTTA ATGCCACAAT ATACAAATTT GCACTTTCTA TTTCGGATTT AAATAGAGAC 
TTCTATAACT CTATGCAGCT AACGGTTGCA CAGCACCCGT CGGAAAACGC CGAGCGGATG
ATGGTGCGTG TGCTGGCTTA TTGTTTAGAG GCCTGCGAGG GATTAGCGTT TACCAAAGGT
TTATCAACAC CTGAAACGCC AGATTTATGG GCCAAGAGCT TAGATGACCA AATAAACCTT
TGGGTGGAAG TTGGGGAGCC TGCTGCAGAA AAAATTAAAA AAGCTACGCG TTTAGCCAAA
AAAGTAAAGG TGTACACCTT TAATAGCAAA TCTGATGTGT GGTGGAGCCA AGAGCAGAAG
AAATTAGAGG CGTTAGATGT TTCTGTTGTG CAATTCCCGT GGGACCAAAT TCAAAGCGTC
ACCAAGTTAC TTGCTCGCAC TATGACTATG TCGGTTACCA TTACCGGCGA TTCGATATTT
GTAAACGCCG ATAATGGTGA TGCAGAAGTT CATTGGCAAA GGCTTCAAAC TACAGAATAA
 
Protein sequence
MALNATIYKF ALSISDLNRD FYNSMQLTVA QHPSENAERM MVRVLAYCLE ACEGLAFTKG 
LSTPETPDLW AKSLDDQINL WVEVGEPAAE KIKKATRLAK KVKVYTFNSK SDVWWSQEQK
KLEALDVSVV QFPWDQIQSV TKLLARTMTM SVTITGDSIF VNADNGDAEV HWQRLQTTE