| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1532 |
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| Symbol | |
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| ID | 3965060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1976725 |
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| End bp | 1977558 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920610 |
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| Product | hypothetical protein |
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| Protein accession | YP_527006 |
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| Protein GI | 90021179 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4455] Protein of avirulence locus involved in temperature-dependent protein secretion |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACGG CAAGCGAAGA ATATTCAGCA GGAAATATAC AAGCAGCACT TGCTGCGATT
GCAGAAGAGA TAAAAGCGTC GCCATCGGAT GCTAAAAAGC GTGCTTTTTT TATAGAGCTG
CTATGTATTG CAGGTGAATA CGAACGAGCA GATCAACAAC TAAATACATT GGTCGTGCTA
GACCCGCAAT CAGCCATTAC CGTGGGCACT TGGCGACAGC TAATTAGGGC TGCGCAGACG
CGTATGGATG TTTACCAGAA TAATGCTGTG CCTGATGTTA TCGATCAGCC TACGCCTGTT
ATTGCCAAAT CCTTAGAATT GTTAGTGGCG TTAAATGCTG ACGATGCTAC CCAAGCTGCA
GCTGCATTGG AGCAGTTAGA AAAAGTAGTT AAACCACTTT GTTTGAACGT AAATGGGAAA
GCTGTAGAGC ATTGGCGTGA CCTAGACGAT GTAAACGCGT ATGTGTTGGA GCTATTGGGC
ACCAACGGAA AATACTTTTG GATTGATTAC GCGCAAATTG AATCTGTTGA ATTTGACCAG
CCTGCACGCC CATTAGATAT GCTGTGGCGG AAAGTGACCA TTACTCTAAA AAGCGGTAGC
GTTGGCGAAG CATTTGTGCC AGCTGTATAC CCCTATAAAA CAGAAGATGA TGCTGCGAAA
CTCGGTCGTT TAACCCAATG GCACGAGCAG TGTGGCTTGA GCCGAGGTGA GGGTTTGCGA
ACTTGGCTAC TAGGGGATGA GGCATTAACA GTATTTGAAG TAAATAACAT TACTGCTAGC
AATAGTGACC AAAACTCAAA TGAAACGTCT ATAGCCTCTG AAGCTGTTAA TTAA
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| Protein sequence | MATASEEYSA GNIQAALAAI AEEIKASPSD AKKRAFFIEL LCIAGEYERA DQQLNTLVVL
DPQSAITVGT WRQLIRAAQT RMDVYQNNAV PDVIDQPTPV IAKSLELLVA LNADDATQAA
AALEQLEKVV KPLCLNVNGK AVEHWRDLDD VNAYVLELLG TNGKYFWIDY AQIESVEFDQ
PARPLDMLWR KVTITLKSGS VGEAFVPAVY PYKTEDDAAK LGRLTQWHEQ CGLSRGEGLR
TWLLGDEALT VFEVNNITAS NSDQNSNETS IASEAVN
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