| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1521 |
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| Symbol | |
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| ID | 3965049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1960096 |
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| End bp | 1960872 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920599 |
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| Product | GTP-binding |
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| Protein accession | YP_526995 |
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| Protein GI | 90021168 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3913] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03373] type VI secretion-associated protein, BMA_A0400 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.102823 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCTG TTGGTGATTT CCAAACAAAC AGCACAGCTA ATCCAGCACC GCAGACAGAT
ACCTGCGGGC TGTTTGGCAA ACTGCCGCAA CAAGGTGATT TTATTTCGCA CTTTTTACCT
GCTGCATTTA CAGATGTTTG GCATGCTTGG CTGCAAGGGT GTTTGGGTGT AAGTAAAGAA
CAGCTTGGCG ACACCTGGTT AGATTTTTAT TTAACCAGCC CTGTTTGGCG CTTTTCACTT
ATGCCCACTA TTACACACCC GCAAAGCGTG GCGGGCATAA TGATCCCAAG TGTGGATGAA
GTCGGCCGCT ACTTCCCGCT TACCTTAGTA CAAATATATA ACCACACACC TTGGTCTGCT
TACTTACATG GCGATGCGTG GTTTAGCCAA CTGGAGAGCG CTGCACTTTT AGCTTTAGAA
GAACATACTA GCTACTCTAA TTTTATCGGC AACTTCGAAA TGCTACCTTC GCTACAGTTA
CCTGAGTTTA GCAATTTTGA AACACTGCAC GCTCAACATT CCTACGCAGA AAATTTTGTA
GTCGAAACAC CACCTAGTAA CAGCGACCAA CAACTGCCTT TAAACCTATT ACACAAAGCC
TACCAGCGAA TTTACGGTGC CTACGGCATA TGGTGGACAC AGGGCTCAGA GCATATTGCA
CCTACACTGT TGGTAAACAG TGGCCTACCC GATGCAGGCC AATTTGCAGC CATGCTAGAT
GGCAACTGGC AACAGTGGGG ATGGAACCTG GAATCTGTAT TAGAAAATAA AAATTAA
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| Protein sequence | MEAVGDFQTN STANPAPQTD TCGLFGKLPQ QGDFISHFLP AAFTDVWHAW LQGCLGVSKE
QLGDTWLDFY LTSPVWRFSL MPTITHPQSV AGIMIPSVDE VGRYFPLTLV QIYNHTPWSA
YLHGDAWFSQ LESAALLALE EHTSYSNFIG NFEMLPSLQL PEFSNFETLH AQHSYAENFV
VETPPSNSDQ QLPLNLLHKA YQRIYGAYGI WWTQGSEHIA PTLLVNSGLP DAGQFAAMLD
GNWQQWGWNL ESVLENKN
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