| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1517 |
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| Symbol | |
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| ID | 3965045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1956365 |
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| End bp | 1957363 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637920595 |
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| Product | 3-oxoacyl-[acyl-carrier-protein] synthase III |
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| Protein accession | YP_526991 |
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| Protein GI | 90021164 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
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| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0306448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00584561 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAATGA ATTGCATATC TAAAATTGCT GGCATTGGCG CTTATTTACC AAAGCAACGT
GTGACGTCAG ATGAGTTAAT GGCGGAAATA GCAAGCACGC GCTTTGGCAC ACCAGAGAAT
TATATCTCAA ACAAGATTGG CATCATAGAG CGCAGAATGG CAGATGAAAA AACACTCGCG
TCAGACATGG CAATCATGGC CTCTGAAGTA GCACTAAGAG ATGCAAACGT ACAAGCTCAC
GAAATTGACT TAATCCTTTA TTGTGGCATC GAAAGAGATT GGCAAGAGCC AGCAACGGCC
CATAGAATAC AGGCCGAGCT TGGGGCCACA TCAGCAATAG TTCTGGATGT TACGAATGCT
TGTCATGGTT TTTTAAATGG CATTTCTATA GCAGATGCAT TTATTGCAAA TCACAGCGCC
CAAACCGTAC TTGTGTGCAC CGGCGAGAAG CAAAGTAACC TAACCTACGA AGCAATTGAT
CAACTTAAAA AGCTATCAAG TAAAGAAGAG TTCCGCAAAA GACTTGGAGG GCTAACAGTA
GGTGACGCTG GAGGGGCAAT GATTATTCAG CGTGGTAATG AACATTCGGG TTTCCAAAAA
ATGAACTTTA TGTCTGATGG TAGCCATACA AACCTATGCT ATTACAAACA TACGGATAGT
GGCACGCAAG GTCAGATGCT AATGCGCGAG ATTACAGTAC AAATATTACG GCTTCATAAA
ATGTTCATAG ACAGTACCTA TGAACTTTTG GGTTGGCAGC CAGAAAGTAT TGACAAACTA
TTTTGTCACC AAACTGGAGC TAAACCGCAC CAAGGAATGG CCAGTTTGGC GCACCAACCC
ATCAACAAGG CGCCTATTAC CTATGATAAT TACGGGAATT TGACCTCCGC CTCAATACCT
GTAAATATGT TCTTAAACCG CCCCCAACGA GGTGAAAAAA TCTTGATTAT GGGAACTGGC
AGCGGCCTCT CCGTGTGCCA AAGCGGATTA ATATTTTAA
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| Protein sequence | MEMNCISKIA GIGAYLPKQR VTSDELMAEI ASTRFGTPEN YISNKIGIIE RRMADEKTLA
SDMAIMASEV ALRDANVQAH EIDLILYCGI ERDWQEPATA HRIQAELGAT SAIVLDVTNA
CHGFLNGISI ADAFIANHSA QTVLVCTGEK QSNLTYEAID QLKKLSSKEE FRKRLGGLTV
GDAGGAMIIQ RGNEHSGFQK MNFMSDGSHT NLCYYKHTDS GTQGQMLMRE ITVQILRLHK
MFIDSTYELL GWQPESIDKL FCHQTGAKPH QGMASLAHQP INKAPITYDN YGNLTSASIP
VNMFLNRPQR GEKILIMGTG SGLSVCQSGL IF
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