| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1516 |
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| Symbol | |
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| ID | 3965044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1955429 |
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| End bp | 1956334 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637920594 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_526990 |
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| Protein GI | 90021163 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000626051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00569858 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | TTGCTATACG CCATCCCAAG TATCTCGGCT ATTGCTATAA AACTAGTTCT ATTATGGCGA
GCCAGACAAA GCCTGCTGAT AACGAACCAA GCTTTTTTAG CCGTTTTCAT TTCACTACTG
GCTCTGAACA TTAGTGAGAT GTTGTTGTTT ACACTCAACC TTAAAGAGAG TGGCGCAACA
ATCCTTGTTA TGGCGCATTA TATATTCGGC CTTTTTTCCA TTCTTTCCGT GTTAGGGATT
ACTCTGTCGA TTACTCGACA GGTCTTTCCT ATTCGCACGC TTGCAACCTT TGGTTGTTTA
ATGGCGATTT TTATCGCAAT ACCAGGGCTC GCAATAGAAG GAACAAAAAG TATTGGATAT
TCCTATACAA GGATTCAAGG CCCATACTAT TTCGTAGTCC AACTTGCCCT ACTTGTTCCA
TTTAGTGCAT CAATTGGCTT GCTAATACAC GGCGCCCTTA GAAGCAAATC TAAAGAAATA
AAAAATAAAT GCTCGGTTTT ATTAATATGC CTAACCCCAT CATTTGTAAG CCTTTTTATA
ATCGTTGCCT TAATGCAATT TGGCTTTCAA ATAAACGCCA CTGTTGTTAT ATCGTTCTCC
ATTAATATTT TACTTTTTGG CTTATTGTAT CTAGAGGGCA AGTACCATAT ATACGGGCTT
CTTTCCTCAC TACCAGGCAC CAAATATAAC GACAGCGCCA GAATCCTGAC TCAAGCCTTG
TTCGACCCAA ACATGCCTCT AGAAAAGGCA AAAGAACTGA TGGATATAGA AAAGACTAGA
TACACGCTAG AACTAACAAG AGGAAATCAA AGCGAAGCTG CACGAATTCT TGGTGTCTCT
AGACCCACGA TCTGCAGAAG AATCAAGCTA ATTGAGAGCC AATATACAAA AGCACGTAAG
CTTTAA
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| Protein sequence | MLYAIPSISA IAIKLVLLWR ARQSLLITNQ AFLAVFISLL ALNISEMLLF TLNLKESGAT
ILVMAHYIFG LFSILSVLGI TLSITRQVFP IRTLATFGCL MAIFIAIPGL AIEGTKSIGY
SYTRIQGPYY FVVQLALLVP FSASIGLLIH GALRSKSKEI KNKCSVLLIC LTPSFVSLFI
IVALMQFGFQ INATVVISFS INILLFGLLY LEGKYHIYGL LSSLPGTKYN DSARILTQAL
FDPNMPLEKA KELMDIEKTR YTLELTRGNQ SEAARILGVS RPTICRRIKL IESQYTKARK
L
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