Gene Sde_1514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1514 
Symbol 
ID3965042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1953613 
End bp1954308 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content51% 
IMG OID637920592 
Productcarboxylesterase 
Protein accessionYP_526988 
Protein GI90021161 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0210024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000187448 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTTTAA CACCAGCACA GCAGGCAGCC GCTAAACAAA CAAGAACAGT CGTTCACGGG 
GCCGGTGAGC CTACCCATGC CGTTATTTGG TTACACGGTT TGGGAGCCTC ATCGGATGAT
TATCCGCCTG TAATCCCATA TTTGGGGTTG TCTAATTCTC GCACCATAAG ATTTGTATTC
CCTCAAGCCC CTGAGCGGCC CATTACAATT AACGGCGGCA TGGTCATGCC TGGCTGGTAC
GACATAAAGG GAATGGATTT GGTCGATAAA GAAGATTTAG AGGGGATGAG CGAGTCCCGT
GCGACTTTAG AGCGTTTAAT TCAGGAGCAG GTGGACAAGG GGGTACCTAC GAGCAACATT
GTTATCGCTG GCTTCTCGCA GGGGGGAGCG GTTGCTTATT ACACCGGTTT ACGCTACTCG
CAAAAACTGG CTGGGATTAT GGCGCTATCT ACCTATATGC CTTTCGCCGG TACTGCAGCG
AGTGAGCACT CAGGTGTGAA TGTGCAAACA CCCATTATGG CAATGCATGG CCTGCACGAT
GGTGTGGTGC CGCTAAGCAT CGGCAAGCAA AGCGCCGACG CAGTAAAAGC CTTAGGTTAT
ACCGTAGAGT GGAAAGGGTA TGCCATGGAG CACAATGTAA TCCCTGAGCA GCTTACTGAT
ATTGGTGTTT GGCTGAATAG GGTGTTTGAG GGGTAG
 
Protein sequence
MTLTPAQQAA AKQTRTVVHG AGEPTHAVIW LHGLGASSDD YPPVIPYLGL SNSRTIRFVF 
PQAPERPITI NGGMVMPGWY DIKGMDLVDK EDLEGMSESR ATLERLIQEQ VDKGVPTSNI
VIAGFSQGGA VAYYTGLRYS QKLAGIMALS TYMPFAGTAA SEHSGVNVQT PIMAMHGLHD
GVVPLSIGKQ SADAVKALGY TVEWKGYAME HNVIPEQLTD IGVWLNRVFE G