Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1514 |
Symbol | |
ID | 3965042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1953613 |
End bp | 1954308 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637920592 |
Product | carboxylesterase |
Protein accession | YP_526988 |
Protein GI | 90021161 |
COG category | [R] General function prediction only |
COG ID | [COG0400] Predicted esterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0210024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000187448 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTTTAA CACCAGCACA GCAGGCAGCC GCTAAACAAA CAAGAACAGT CGTTCACGGG GCCGGTGAGC CTACCCATGC CGTTATTTGG TTACACGGTT TGGGAGCCTC ATCGGATGAT TATCCGCCTG TAATCCCATA TTTGGGGTTG TCTAATTCTC GCACCATAAG ATTTGTATTC CCTCAAGCCC CTGAGCGGCC CATTACAATT AACGGCGGCA TGGTCATGCC TGGCTGGTAC GACATAAAGG GAATGGATTT GGTCGATAAA GAAGATTTAG AGGGGATGAG CGAGTCCCGT GCGACTTTAG AGCGTTTAAT TCAGGAGCAG GTGGACAAGG GGGTACCTAC GAGCAACATT GTTATCGCTG GCTTCTCGCA GGGGGGAGCG GTTGCTTATT ACACCGGTTT ACGCTACTCG CAAAAACTGG CTGGGATTAT GGCGCTATCT ACCTATATGC CTTTCGCCGG TACTGCAGCG AGTGAGCACT CAGGTGTGAA TGTGCAAACA CCCATTATGG CAATGCATGG CCTGCACGAT GGTGTGGTGC CGCTAAGCAT CGGCAAGCAA AGCGCCGACG CAGTAAAAGC CTTAGGTTAT ACCGTAGAGT GGAAAGGGTA TGCCATGGAG CACAATGTAA TCCCTGAGCA GCTTACTGAT ATTGGTGTTT GGCTGAATAG GGTGTTTGAG GGGTAG
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Protein sequence | MTLTPAQQAA AKQTRTVVHG AGEPTHAVIW LHGLGASSDD YPPVIPYLGL SNSRTIRFVF PQAPERPITI NGGMVMPGWY DIKGMDLVDK EDLEGMSESR ATLERLIQEQ VDKGVPTSNI VIAGFSQGGA VAYYTGLRYS QKLAGIMALS TYMPFAGTAA SEHSGVNVQT PIMAMHGLHD GVVPLSIGKQ SADAVKALGY TVEWKGYAME HNVIPEQLTD IGVWLNRVFE G
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