| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1511 |
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| Symbol | |
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| ID | 3965039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1949917 |
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| End bp | 1952301 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920589 |
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| Product | DNA polymerase II |
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| Protein accession | YP_526985 |
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| Protein GI | 90021158 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000196312 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGTTTTCG CTTCTTCTAA AAACAAGGTT TCTGGGCCCA TTTCTGGATT TATTCTTACG
CGTGCGCGTA GAGAAATTGC CGGTAAGTTA TGTTTAGAGT GTTGGCTGAA TACCCCTAAT
GGAGCCGTTC AGCTTATAAC TGATACGCAA GATGATGTGT TTTTTATTGC GCAGCAGGAC
TTTACTGCTG CCAGCGAGTT GCTTGCTGGT CTGGATTTTC GATATCGCCC CCTTGAGTTA
GCCACTTTTG AGCACTTGCC TGTAGGGGCT TTGTATTTTA GTAGTGGGGC TACCTCTTTT
AAAGCTAAGC AAATATTAGA AGGGAGCGGT GTTACCCTTT ACGAAGCGGA TATTCGTTTA
ACAGATCGCT ACCTCATGGA GCGCTTTATT TATGGTAGCG CGCAGTTTAA TGGCGTGCAT
AACGCTACAA CCTCCCAGAA GTTTCAAAGT TATTCTAACG CCCAGCTTAA GCCAGCCAAT
TACACGCCCA GCTTAAAAGT TTTAAGTATT GACATTGAGT GCAGCGAGGT AGGGGAGCTT
TTTTCTATAG GTTTGGCTGC AGACGGATAC AAATGTGTGC TTATGATAGG TGGGCGACAA
GACGATGCCC CGAGCTGGAT AGACTGGGTG GATGACGAGC GTGCGCTATT ACAAACGTTT
GTGCGCCGAG TAGGGCAGTT CGACCCCGAT GTGTTCGTAG GTTGGAATGT AATTAATTTT
GATTTTAGGT TGCTAATAAA GCGCGCAGAG CTACACCGAG TTCGATTAAA CCTTGGCCGC
GATGCAAAGC CACTACATTG GCGCGATGCC CCCGGTGAAG TTGATCAAGG TTATGTCTCT
ATGCCCGGGC GCGTAGTAAT CGACGGTATA GATGCTTTGC GTACCGCAAC CTATCATTTC
GATAGCTTTA GCTTGGAATA TGTATCGCAG GCGTTGCTTG GTAAGGGTAA GAAAACTGAC
AACGTAGAAA ATAGGTTGGC AGAAATAGAG CACGATTTTT TACACAATAA GGTAAAGCTA
GCAGAATACA ACTTGCAAGA TTGCGAGTTA GTGTTGGATA TTTTTGAGCA TACACAATTG
CTGGAATTCC TTGTGCTGCG CAGTCAAATT ACAGGGTTGG AGTTAGATAA ATTAGGTGGC
TCTGTCGCTG CATTTATAAA TTTATATTTA CCAAAGCTAC ACCGAGCTGG TTATGTGTCG
CCCAACCGGC CGGAAGGTGG CGGTTTGGCA AGCCCTGGCG GTTACGTAAT GGATTCGCTG
CCCGGCCTTT ATAAACATGT GCTGGTGCTC GATTTTAAGA GTCTTTATCC GTCAATTATT
CGCACGTTTA AAATAGACCC CTTAGGTTTG ATTGAGGGCT TAAAGCAACC AGAAAATGCA
ATTCCGGGCT ATAAGGGGGC GTTGTTTTCA AGAGAGAAGC ATTTTTTACC GCAAATTATT
ACCTCGCTTT GGCAGCAGCG TGACGAAGCG AAAAAGAATA AAGACAGTGC GCGTTCGCAG
GCGATTAAAA TATTAATGAA TTCGTTTTAC GGCGTGTTAG GTTCTGGTGG CTGCCCGTTT
TACGATACGC GACTTGCCAG CTCGATTACC ATGCGCGGCC ACGACATAAT GAAACAAACG
GCAAAGTGGA TAGAAGCCGA GGGCTACAAG GTTATTTATG GCGATACAGA TTCCACCTTC
GTGTGGCTTG ATGGTGAGTA TAGTAATGAG CAGGCTCAAG CAATTGGGCA AAGCTTACAG
GTGCTAATAA ACGAAAAGTG GCAACAACTT ATTCGCGAGG AGTACCGGCT AGAGTGTAAC
CTAGAAATTG AGTTTGAAAC GCACTTTTCG CGCTTTATTA TGCCTACCAT TCGTGGTTCT
TCGCTTGGCA GTAAAAAGCG CTATGCGGGC GTTAAGCAAA CTAAACAAGG TGGGGAGCTA
GTTTTTAAAG GGTTAGAAAC GGTGCGTTCA GATTGGACTG CACTTGCCAA AAAATTTCAA
ACCCAACTTT ATAGTATGGT GTTTGAAGAT AAAAACGTTA AACAGTATGT ACAGAAGATA
ATTGCAGAAA CTCGCGCAGG GTTACACGAT AATGAACTAA TTTACCGCAA GCGATTGCGC
CGCAGGTTGG ATCATTACGT AAAAAGTATA CCGCCACATG TTAAAGCTGC GCGTATGGCA
GATGCTGCGA ATGCGCTTGC TGGCAAGCCT TTGCGCTATC AACATAAAGG GTGGATAAAC
TATGTATTAA CACTAAATGG GCCAGAGGCC GTAGAGCATC AAACTAGCCC AATAGATTAC
GATCATTACA TTGAAAAACA AATACGCCCA ATTGCCGAGG CCATTCTGCC TTTTATCGGC
GTTTCTTTCG AAGAAATTAG TGCTTCTCAG CTGGGGCTTT TTTAA
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| Protein sequence | MVFASSKNKV SGPISGFILT RARREIAGKL CLECWLNTPN GAVQLITDTQ DDVFFIAQQD
FTAASELLAG LDFRYRPLEL ATFEHLPVGA LYFSSGATSF KAKQILEGSG VTLYEADIRL
TDRYLMERFI YGSAQFNGVH NATTSQKFQS YSNAQLKPAN YTPSLKVLSI DIECSEVGEL
FSIGLAADGY KCVLMIGGRQ DDAPSWIDWV DDERALLQTF VRRVGQFDPD VFVGWNVINF
DFRLLIKRAE LHRVRLNLGR DAKPLHWRDA PGEVDQGYVS MPGRVVIDGI DALRTATYHF
DSFSLEYVSQ ALLGKGKKTD NVENRLAEIE HDFLHNKVKL AEYNLQDCEL VLDIFEHTQL
LEFLVLRSQI TGLELDKLGG SVAAFINLYL PKLHRAGYVS PNRPEGGGLA SPGGYVMDSL
PGLYKHVLVL DFKSLYPSII RTFKIDPLGL IEGLKQPENA IPGYKGALFS REKHFLPQII
TSLWQQRDEA KKNKDSARSQ AIKILMNSFY GVLGSGGCPF YDTRLASSIT MRGHDIMKQT
AKWIEAEGYK VIYGDTDSTF VWLDGEYSNE QAQAIGQSLQ VLINEKWQQL IREEYRLECN
LEIEFETHFS RFIMPTIRGS SLGSKKRYAG VKQTKQGGEL VFKGLETVRS DWTALAKKFQ
TQLYSMVFED KNVKQYVQKI IAETRAGLHD NELIYRKRLR RRLDHYVKSI PPHVKAARMA
DAANALAGKP LRYQHKGWIN YVLTLNGPEA VEHQTSPIDY DHYIEKQIRP IAEAILPFIG
VSFEEISASQ LGLF
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