| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1509 |
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| Symbol | |
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| ID | 3965037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1948021 |
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| End bp | 1949217 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920587 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_526983 |
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| Protein GI | 90021156 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.569341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000206936 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACATTTT CTACCCTTGG TCTATGTGAC CCAATCCTGC AGGCCTTAAA CGACGTGGGC
TACGAAGCGC CTACTGCCAT TCAAGAGCAG GCTATACCAC CTATTTTGGC TGGGCGAGAT
GTGCTGGCGA AGGCGCAAAC AGGTACAGGT AAAACGGCAA GCTTTGTGTT GCCAATACTG
CAAACCTTTA AAGATAAAGC GAACCGCAGA GCCAAGCGCA TAAAGGCGCT TATTTTGGTG
CCTACGCGCG AGCTGGCCAT TCAAGTAGAA GATAACATTA GGTTGTACGG TGCGCATTTA
AGCCTCACAT CTATGGCTAT GGTAGGTGGG GTAGATATTG AGCCGCAAAA GGCAAAGCTT
GTGGAGGGGG TGGATATTCT AGTCGCCACG CCGGGCCGAC TTATAGATTT AATGCATCAG
CGTGCCTTAC ATTTCGATGA GCTGGAATTT TTAGTATTAG ATGAAGCCGA TAGAATGCTC
GATATGGGCT TTATAGGGGA TATCAATAAA ATTATTGAGC GCCTGCCGGA GCGCAGGCAA
AGCTTGTTAT TTTCTGCAAC GCTTTCTGAT AAGGTGCGTT TGCTAGCAAA AACCGCCATA
GTTAATGCGG TAGAAATTTC CATTGCCGCG GATAAAAAAT CTACCCCGCC GATTACTCAG
TGGTTGGTAA CTGTAGACAA ACATAACAAG TCGGCACTGC TCACGCATTT AATTAATGAG
AATGGTTGGA AGCAGGCGTT AATATTTATC CGCACCAAGC ACGGTGCAGC CAAGCTGGTT
ACACAGCTAG AAAAGCGTGG TATTAAGGCC GAATCAATTC ATAGCGGCCG AAGCCAAGCA
GTACGCACCC AACTACTAGC AGATTTTAAG GCTGGAAAAA TAGGCTTTTT AGTGGCCACA
GGCATTGCCG CACGCGGTAT CGATATAGAT GATTTGGACC GTGTAGTTAA CTATGACTTA
CCCGACGATG CACATGATTA TGTGCATCGT ATTGGCCGCA CAGGCAGGGC AGGCGTAAGT
GGCGAAGCCG TATCGTTAAT TTCTATGGAT GATTTTAAGC GCTTGTGTGC AATAGAAAGT
AGGCTTGGCC ATATTATTGA TAGAAAAGAA GTGGCAGAAT TTAAAGCAGT AAAAGAAGTG
CCTATATCTA TATTAAATTA CGTTAAGAAA AGTGCAAAAA AGCCACAGAG AAGGTAA
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| Protein sequence | MTFSTLGLCD PILQALNDVG YEAPTAIQEQ AIPPILAGRD VLAKAQTGTG KTASFVLPIL
QTFKDKANRR AKRIKALILV PTRELAIQVE DNIRLYGAHL SLTSMAMVGG VDIEPQKAKL
VEGVDILVAT PGRLIDLMHQ RALHFDELEF LVLDEADRML DMGFIGDINK IIERLPERRQ
SLLFSATLSD KVRLLAKTAI VNAVEISIAA DKKSTPPITQ WLVTVDKHNK SALLTHLINE
NGWKQALIFI RTKHGAAKLV TQLEKRGIKA ESIHSGRSQA VRTQLLADFK AGKIGFLVAT
GIAARGIDID DLDRVVNYDL PDDAHDYVHR IGRTGRAGVS GEAVSLISMD DFKRLCAIES
RLGHIIDRKE VAEFKAVKEV PISILNYVKK SAKKPQRR
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