Gene Sde_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1506 
Symbol 
ID3965034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1940162 
End bp1940734 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content52% 
IMG OID637920584 
ProductPBP family phospholipid-binding protein 
Protein accessionYP_526980 
Protein GI90021153 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000587287 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000712833 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAT CATTCATTCG GGCTTTCGCC AATACCGCAA TAACGGCTGT AGCTTTTAGC 
GTGAGCTGCG CGGTGTATGC TGGCTCACTT GTGCTTACTA GTAGTGATAT AGGCGATGGT
AAGCATATGG CCAAAACGCA GGAGTATACG GGGTTTGGTT GTGCTGGTGG CAACTTGTCC
CCCCAGCTTA GCTGGCGTGG TGCGCCAGAG GGCACAAAAG CATTTGCATT ACTGGTGCAC
GACCCCGATG CGCCTACAGG CAGTGGGTGG TGGCACTGGC AGGTGGTTAA CATTCCCGCC
GGTACCACGT CGCTACCCGC TGGCGCGGGG GCGGTGAATA GTAAGTTGTT GCCAAAAGGT
GCTTCCCAAA ACACTAACGA TTATGGTGAG AAAGCCTTTG GCGGTGCTTG CCCACCGGTT
GGCCACGGCG TGCATCGCTA TAGATTTACT TTGCATGCTT TGTCCAAACC ACTAGAGCTA
CCTGAAAATG CTTCAGCCGC TTTAACTGGG TATATGGTTA AAGCGCACAC TATAGAGGAA
GCAACAATAG AGGCCTTGTA CAAACGCGAC TAA
 
Protein sequence
MKKSFIRAFA NTAITAVAFS VSCAVYAGSL VLTSSDIGDG KHMAKTQEYT GFGCAGGNLS 
PQLSWRGAPE GTKAFALLVH DPDAPTGSGW WHWQVVNIPA GTTSLPAGAG AVNSKLLPKG
ASQNTNDYGE KAFGGACPPV GHGVHRYRFT LHALSKPLEL PENASAALTG YMVKAHTIEE
ATIEALYKRD