Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1506 |
Symbol | |
ID | 3965034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1940162 |
End bp | 1940734 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637920584 |
Product | PBP family phospholipid-binding protein |
Protein accession | YP_526980 |
Protein GI | 90021153 |
COG category | [R] General function prediction only |
COG ID | [COG1881] Phospholipid-binding protein |
TIGRFAM ID | [TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0000587287 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000712833 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAT CATTCATTCG GGCTTTCGCC AATACCGCAA TAACGGCTGT AGCTTTTAGC GTGAGCTGCG CGGTGTATGC TGGCTCACTT GTGCTTACTA GTAGTGATAT AGGCGATGGT AAGCATATGG CCAAAACGCA GGAGTATACG GGGTTTGGTT GTGCTGGTGG CAACTTGTCC CCCCAGCTTA GCTGGCGTGG TGCGCCAGAG GGCACAAAAG CATTTGCATT ACTGGTGCAC GACCCCGATG CGCCTACAGG CAGTGGGTGG TGGCACTGGC AGGTGGTTAA CATTCCCGCC GGTACCACGT CGCTACCCGC TGGCGCGGGG GCGGTGAATA GTAAGTTGTT GCCAAAAGGT GCTTCCCAAA ACACTAACGA TTATGGTGAG AAAGCCTTTG GCGGTGCTTG CCCACCGGTT GGCCACGGCG TGCATCGCTA TAGATTTACT TTGCATGCTT TGTCCAAACC ACTAGAGCTA CCTGAAAATG CTTCAGCCGC TTTAACTGGG TATATGGTTA AAGCGCACAC TATAGAGGAA GCAACAATAG AGGCCTTGTA CAAACGCGAC TAA
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Protein sequence | MKKSFIRAFA NTAITAVAFS VSCAVYAGSL VLTSSDIGDG KHMAKTQEYT GFGCAGGNLS PQLSWRGAPE GTKAFALLVH DPDAPTGSGW WHWQVVNIPA GTTSLPAGAG AVNSKLLPKG ASQNTNDYGE KAFGGACPPV GHGVHRYRFT LHALSKPLEL PENASAALTG YMVKAHTIEE ATIEALYKRD
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