| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1505 |
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| Symbol | |
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| ID | 3965033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1939262 |
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| End bp | 1940074 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637920583 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_526979 |
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| Protein GI | 90021152 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000918966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000679283 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAAAAC TTAAGTATGC TGCAAAGCTT GCTACTGCCG AAAATACGGC ACTACCCTTT
GCTGTTTATA CGTCGCTCAA AGAGCAAACG ATATTAAATG TGCCAATTGT TAAGCCCTTA
CTTGTTTTCG TGTTAGATGG TTGTAAAAAG CTGGGTGCTA ACGGAGATGT GCGATGTGTA
AATGGTCGTT TTGTTTTTTT ATCTAACGGT ACTAAAATTG ATATGCGGAA TATTGCTGAA
AGTGATGAAT ATTTTGCGCT GCTAATAGAA TTTGACTATA CAGATTTCAA TTGCCTTCAT
CAAAAGGCTG TAAATATTAA TGCTGCGCCA TACTTTTTGG GGGAGATAAC CCCTCTTTTA
GAGGGCACGC TACAGCAATT TATAGAGTGG GCAGCAATTG CACCAGCTGA ACTTTGGCAT
ATTCGCAGGC AGGAGCTTTT GCAAACGCTG TTTCATTTAG GGTATACGCA AGTGTGCTCT
ATTGCCGGGG CTCCAAGCCT TAGCGCTAAA GTTCACGCCA TTATAAGTAC AGATTTAACC
TACGATTGGA CAATGGATGT TATTACCCAA AAGCTCGCGA TGAGCGAGTC CACTATTCGC
CGCAAGCTTA CTGCTGAAGG CACAAGTTTG CAGGCTGTTA AAGATAGTGC CCGGCTAAGT
TTTGGGTTGC ATCAGGTTCA GTCTACTTTT CAACCCATTA ACCATATTGC AGAGCAGTGC
GGTTACTTAT CTCAATCTAG GTTTACCAAT AAGTTTAAGC AGTTGTTTGG TGTTACACCT
ACGGCGTTAA GAAAAACACG CTTGAGCGAT TAG
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| Protein sequence | MQKLKYAAKL ATAENTALPF AVYTSLKEQT ILNVPIVKPL LVFVLDGCKK LGANGDVRCV
NGRFVFLSNG TKIDMRNIAE SDEYFALLIE FDYTDFNCLH QKAVNINAAP YFLGEITPLL
EGTLQQFIEW AAIAPAELWH IRRQELLQTL FHLGYTQVCS IAGAPSLSAK VHAIISTDLT
YDWTMDVITQ KLAMSESTIR RKLTAEGTSL QAVKDSARLS FGLHQVQSTF QPINHIAEQC
GYLSQSRFTN KFKQLFGVTP TALRKTRLSD
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