Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1498 |
Symbol | |
ID | 3965026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1930984 |
End bp | 1932006 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637920576 |
Product | hypothetical protein |
Protein accession | YP_526972 |
Protein GI | 90021145 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00728631 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATATAC GGTCCATTGC CACCATCACC CTTTCTGTTG CTTTCTTCGT ATTAGTTGTG AGCGGTATTT TGTTGTACGC AACACCTTAC AATTTTTGGA CTGGCTCTCT GCATGTGTGG GGCGCTATTT TATTTTTGGT GTGTATTGTT TGGCATATTA AGCACAATGC AAAAACGTAC AAAAACCATA TGAGTAAAAA GCCGGGTAGG TGGGCAATGG GGGCGGCGGT TTTTGGTGTT GTGCCTATTG CAATTGCTTT GGGTTTGAAT TTGCCGCCGG TTTATAGCGT TGTACAGTTT GGTTACGATT TAAAAACATC CGCAGAGCCA CCTAAGCGGG AATATACCAT TGTGGATTTA ACCAAAGACA ATAGCGCCCC TAAACTTAGC GTATTTTTTA AAGCGGGCTC TTCGTACGAG TCTGAACCGC AGCCGATATT TTTGAATATT TCCTATACCA GCGTGCCTCA AATTGTAGTG TGGATGGAAA CCTTAGATGG TGAGTATGTG GATACATTGT ATGTTACGGG TAAAACGTCT AACTCTAGCT ATCGCACGAG CGATGAAGAG CCCGACGTAG TGAGAAGGCC AGAAGCGTTA CCCTACTGGA GCCATAAGCG CGGAGTTGTG GCGAGTGACG GGTTGTATAT GCCAGAGCAC AATAATACAG ATTTCGATGG TATTACCGCT GCTACACCTA AGGTAGATTA TCAGGTAGAT ATGCCTTTGC CCAGTACGGG GCAATATAAG TTGATGGTTG AAGTGAACCG CTCTTACGAT TTTAATGAGT ACTACAGTAA AACCCGTTTC CCTGATGATA CTGTGTATAG CGGGCCTGGG TCCTCTGGAC AGCCATCGTT AGTGTATGAA GCGATTGTAA ACTCTGCTAA AGCAAAGCAA TTTATATTTA ATTTAGTTGG ACACGGACAT CATTCAGGTA AAGATGGTGT GCTTTACCGC GGCCTAGAAA ATATTACTAC GGCCAAAAAT ATATTGGATT TTATTGTCGC TACATTAGAT TAA
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Protein sequence | MNIRSIATIT LSVAFFVLVV SGILLYATPY NFWTGSLHVW GAILFLVCIV WHIKHNAKTY KNHMSKKPGR WAMGAAVFGV VPIAIALGLN LPPVYSVVQF GYDLKTSAEP PKREYTIVDL TKDNSAPKLS VFFKAGSSYE SEPQPIFLNI SYTSVPQIVV WMETLDGEYV DTLYVTGKTS NSSYRTSDEE PDVVRRPEAL PYWSHKRGVV ASDGLYMPEH NNTDFDGITA ATPKVDYQVD MPLPSTGQYK LMVEVNRSYD FNEYYSKTRF PDDTVYSGPG SSGQPSLVYE AIVNSAKAKQ FIFNLVGHGH HSGKDGVLYR GLENITTAKN ILDFIVATLD
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