Gene Sde_1498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1498 
Symbol 
ID3965026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1930984 
End bp1932006 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content43% 
IMG OID637920576 
Producthypothetical protein 
Protein accessionYP_526972 
Protein GI90021145 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00728631 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATATAC GGTCCATTGC CACCATCACC CTTTCTGTTG CTTTCTTCGT ATTAGTTGTG 
AGCGGTATTT TGTTGTACGC AACACCTTAC AATTTTTGGA CTGGCTCTCT GCATGTGTGG
GGCGCTATTT TATTTTTGGT GTGTATTGTT TGGCATATTA AGCACAATGC AAAAACGTAC
AAAAACCATA TGAGTAAAAA GCCGGGTAGG TGGGCAATGG GGGCGGCGGT TTTTGGTGTT
GTGCCTATTG CAATTGCTTT GGGTTTGAAT TTGCCGCCGG TTTATAGCGT TGTACAGTTT
GGTTACGATT TAAAAACATC CGCAGAGCCA CCTAAGCGGG AATATACCAT TGTGGATTTA
ACCAAAGACA ATAGCGCCCC TAAACTTAGC GTATTTTTTA AAGCGGGCTC TTCGTACGAG
TCTGAACCGC AGCCGATATT TTTGAATATT TCCTATACCA GCGTGCCTCA AATTGTAGTG
TGGATGGAAA CCTTAGATGG TGAGTATGTG GATACATTGT ATGTTACGGG TAAAACGTCT
AACTCTAGCT ATCGCACGAG CGATGAAGAG CCCGACGTAG TGAGAAGGCC AGAAGCGTTA
CCCTACTGGA GCCATAAGCG CGGAGTTGTG GCGAGTGACG GGTTGTATAT GCCAGAGCAC
AATAATACAG ATTTCGATGG TATTACCGCT GCTACACCTA AGGTAGATTA TCAGGTAGAT
ATGCCTTTGC CCAGTACGGG GCAATATAAG TTGATGGTTG AAGTGAACCG CTCTTACGAT
TTTAATGAGT ACTACAGTAA AACCCGTTTC CCTGATGATA CTGTGTATAG CGGGCCTGGG
TCCTCTGGAC AGCCATCGTT AGTGTATGAA GCGATTGTAA ACTCTGCTAA AGCAAAGCAA
TTTATATTTA ATTTAGTTGG ACACGGACAT CATTCAGGTA AAGATGGTGT GCTTTACCGC
GGCCTAGAAA ATATTACTAC GGCCAAAAAT ATATTGGATT TTATTGTCGC TACATTAGAT
TAA
 
Protein sequence
MNIRSIATIT LSVAFFVLVV SGILLYATPY NFWTGSLHVW GAILFLVCIV WHIKHNAKTY 
KNHMSKKPGR WAMGAAVFGV VPIAIALGLN LPPVYSVVQF GYDLKTSAEP PKREYTIVDL
TKDNSAPKLS VFFKAGSSYE SEPQPIFLNI SYTSVPQIVV WMETLDGEYV DTLYVTGKTS
NSSYRTSDEE PDVVRRPEAL PYWSHKRGVV ASDGLYMPEH NNTDFDGITA ATPKVDYQVD
MPLPSTGQYK LMVEVNRSYD FNEYYSKTRF PDDTVYSGPG SSGQPSLVYE AIVNSAKAKQ
FIFNLVGHGH HSGKDGVLYR GLENITTAKN ILDFIVATLD