Gene Sde_1491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1491 
Symbol 
ID3965228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand+ 
Start bp1919941 
End bp1920519 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content44% 
IMG OID637920568 
Productcytochrome b561 
Protein accessionYP_526965 
Protein GI90021138 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.336708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0588061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAG ATAGAGTTGA GTATGTAACG CAAGCGAGTG CCGAATTACC GCAAAACCCC 
AAGAGCTACA ATAAGCTCTC TATTGGCTTG CATTGGTTAA TGGTGCTTTT ATTTATTGCG 
GTGTATGCAA CCATAGAGTG CCGAACATTT TTTGAGCGCG GCACAGACAT GCGCAATTTA 
TTAAAAGAGT GGCATTTTAT TTTAGGGTTA ACCATTTTTA CATTGGTATG GTTAAGGTTG 
GCTGTACGCG TGCTAAAACC TGCACCGCCC ATTCTACCCA CGCCACCAAA ATGGCAAACC 
CTGCTCGCGC GGTTAGTTCA TGCGGTGCTG TATGCACTTA TGATTGGTAT GCCCATTGCC 
GGCTGGTTAA TTTTAAGCGG CGAGGGCAAA CCTATTCCAT TTTGGGGTTT AGAGCTGCCC 
GCACTTATGG GGCCAAATAA AGACCTCGCC CACGAAATAG AAGAGTTGCA CGAATTGTTT 
GGTAAAGTGG GGTATTTTCT AATTGCGTTC CATGCCATTG CGGCGTTAGT GCATCACTAC 
TTTTTTAAAG ATAATACTTT GGTAAGAATG TTGAAGTAA
 
Protein sequence
MSEDRVEYVT QASAELPQNP KSYNKLSIGL HWLMVLLFIA VYATIECRTF FERGTDMRNL 
LKEWHFILGL TIFTLVWLRL AVRVLKPAPP ILPTPPKWQT LLARLVHAVL YALMIGMPIA 
GWLILSGEGK PIPFWGLELP ALMGPNKDLA HEIEELHELF GKVGYFLIAF HAIAALVHHY 
FFKDNTLVRM LK