| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1487 |
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| Symbol | |
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| ID | 3965224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1913511 |
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| End bp | 1916192 |
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| Gene Length | 2682 bp |
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| Protein Length | 893 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920564 |
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| Product | Beta-glucosidase |
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| Protein accession | YP_526961 |
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| Protein GI | 90021134 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00296047 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.272235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAC ACTTTTTAGT AGGTGTAATT ACGTTAGGGG TAATTCTGCA GGGGCTAACT
GCATGTAGCA AAAGCGCTGC ACCTAATGCC AATCAACCGC AAGATACCGC AGCTAGTACG
GCTACCTACC CGTTTAGGGA TGCAAGCTTA AGTGTAGATG CCCGCGTAGA CGACTTGGTA
TCGCGTTTAA CCACAACCGA AAAAATTGCC CAAATGTTTA ACGATACGCC CGCAATCGAG
CGATTGGGTA TTCCCGCCTA CAATTGGTGG AACGAATCGT TGCACGGTGT GGCCCGTGCG
GGTAAAGCAA CGGTATACCC GCAGGCAATA GGCTTAGCGT CTACATTTGA TGAAGACTTA
ATGTTGCGCG TGGCTACTTC TATTTCTGAT GAGGGGCGCG CTAAGTATCA CGACTTCCTA
TCGAAAGACG TGCGCACCAT ATACGGCGGG CTTACCTTTT GGTCGCCAAA TATTAATATC
TTCCGCGACC CGCGTTGGGG CAGGGGGCAA GAAACCTACG GTGAAGACCC GTTCTTAACG
GGGCGTATGG CCATTAATTT TGTTAAGGGT ATTCAAGGCG AAAACGACAA CAGCGATTAC
CTAAAAGCCG TAGCGACAAT TAAGCACTAT GCCGTACACA GCGGCCCCGA AAAAACGCGT
CATTCGGATG ACTACCATCC AACCCGTAAA GATTTATTCG AAACCTATTT GCCTGCATTT
CGCATGGCAA TAGCAGAGAC TAACGTGCAA TCGTTAATGT GTGCCTACAA CCGTGTAGAT
GGGGCACCTG CCTGTGGCAA TAATGAATTA ATGCAAGAAA TTTTGCGTGG CGATATGGGC
TTTAACGGTT ATGTCGTGTC TGACTGTGGC GCCATTGCCG ATTTTTACGA GAGTAGATCG
CACCACGTGG TTGACTCACC TGCAGAGGCT GCAGCGTGGG CCGTTAAATC GGGTACCGAT
TTAAACTGTG GCGATTCACA TGGCAATACC TACACCAACC TGCATTACGC GTTACAGCAA
GGTTTAATTA CAGAAGATTA TATTGATATA GCGGTAAAGC GTTTGTTTAA AGCGCGTATT
AAGCTTGGCA TGTTTGACGA GCAAGACCGC GTGCCTTACA GCGAAATTGG TATGGATGTT
GTAGGTTCAC CTAAGCACCT AGCGCTAACC CAAGAAGCGG CAGAAAAATC TATTGTGCTG
CTAAAAAACA ATGGTGTATT GCCATTAAAA GCAGGGGTAA AGGTAGCCGT AATAGGGCCA
AATGCAGTTG ATGAAGATGT ATTGGTAGGC AACTACCACG GCGTACCAGT GAAACCTGTG
TTGCCGCTAG AGGGGATTGT TAATCGTGTT GGCGAGGCCA ACGTATTTTA TGCCCCAGGC
AGTGCACAAA TAGCCGATAT ATACAGCCAC TACGAACCGA TAAGTGCAGA AAATTTTTAT
CATAAAGATG CAAATGGTAA TTTAGCTGCA GGCTTAAAAG CAGAGTATTA CGCCGATTAT
TACAACGCAG CTGAAATTAA CGACGATACC TTTAGCGCAA CCCCAGCGTT AAATAGAATT
GATGCAGATA TTAATTTCTC TTGGCCTGTA TCGCCTATTG ATAATTCGTT AGATGATGAA
TTTAGTGCAG TATGGACAGG CATACTTAAA CCGAAAAAGT CGGGTAGCTA CCGTTTCTCG
GGCACGGTTG CATTAGCCAT TAACGGCAAA CCTGTTAATG GGGCTGTTAA CCTAAAGGCA
GGTGAAAGCT ATAACATAAA AGCTATTTTT GGCGTGCAAA AATGGTGGCC CGTTAATGCA
ATACACCCGT ACGGAAAACT TACTTGGCTA GATGAGTCGC GCGATTTAGA AGAAGAGGCA
TTAGCTGCTG CCCGAAAAGC CGATGTGATT ATTTTTATGG GCGGTATAGA TGCGCACCTT
GAAGGCGAAG AAATGCCGCT AGAGCTAGAT GGCTTTACTC ACGGTGATCG TACGCACATT
AATTTACCTA AAGTACAAAC CAATTTGCTT AAACAATTAA AAGCAACGGG TAAACCTGTT
GTAATGGTTA ACTTTAGTGG TAGTGCCATG GCTTTAAATT GGGAAAGCGA AAAGCTAGAC
GCAATACTGC AAGCGTTTTA CCCAGGTGAA GCAACCGGTA CAGCGTTAGC TAATATTTTG
TGGGGCGATG TAAGCCCGAG TGGCCGCTTA CCTGTAACCT TTTACAAAGG CGTAGACGAT
CTACCAGCAT TTAATGATTA CCACATGGAA AACCGCACCT ATAAATTTTA CCGCGGTGAG
CCTTTGTATG CATTTGGCCA CGGTTTAGGT TACGTTGATT TTGCTTATAA CAATTTAGTC
GTAGCAAATA CTGCAGAAGC GGGCAAAGCG CTACCTATAG CTGTAAGCGT AACCAATACC
GGTAAAATGC AAGCAGAAGA CGTTGCCCAA GTTTATATAA GTTTGCTAGA TGCCCCCGCA
AACACGCCCA TCCGCGATTT AAAAGCGTTT AAACGTACCA AGCTTGCGGC AGGCGAAAGC
ACCGAGCTTG AATTTAACTT GCCGGCGAGA GTGCTTACCT ATATAGACGA TAATGGTAAA
ACCCAAACCT ATACTGGCAG GGTAGAAGTT ACTGTTGGCT CTGGGCAAAA GGGATACGTA
AAAGAAAATG CGATAGCTGT AGCGACTATT AACGTTCAGT AG
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| Protein sequence | MNKHFLVGVI TLGVILQGLT ACSKSAAPNA NQPQDTAAST ATYPFRDASL SVDARVDDLV
SRLTTTEKIA QMFNDTPAIE RLGIPAYNWW NESLHGVARA GKATVYPQAI GLASTFDEDL
MLRVATSISD EGRAKYHDFL SKDVRTIYGG LTFWSPNINI FRDPRWGRGQ ETYGEDPFLT
GRMAINFVKG IQGENDNSDY LKAVATIKHY AVHSGPEKTR HSDDYHPTRK DLFETYLPAF
RMAIAETNVQ SLMCAYNRVD GAPACGNNEL MQEILRGDMG FNGYVVSDCG AIADFYESRS
HHVVDSPAEA AAWAVKSGTD LNCGDSHGNT YTNLHYALQQ GLITEDYIDI AVKRLFKARI
KLGMFDEQDR VPYSEIGMDV VGSPKHLALT QEAAEKSIVL LKNNGVLPLK AGVKVAVIGP
NAVDEDVLVG NYHGVPVKPV LPLEGIVNRV GEANVFYAPG SAQIADIYSH YEPISAENFY
HKDANGNLAA GLKAEYYADY YNAAEINDDT FSATPALNRI DADINFSWPV SPIDNSLDDE
FSAVWTGILK PKKSGSYRFS GTVALAINGK PVNGAVNLKA GESYNIKAIF GVQKWWPVNA
IHPYGKLTWL DESRDLEEEA LAAARKADVI IFMGGIDAHL EGEEMPLELD GFTHGDRTHI
NLPKVQTNLL KQLKATGKPV VMVNFSGSAM ALNWESEKLD AILQAFYPGE ATGTALANIL
WGDVSPSGRL PVTFYKGVDD LPAFNDYHME NRTYKFYRGE PLYAFGHGLG YVDFAYNNLV
VANTAEAGKA LPIAVSVTNT GKMQAEDVAQ VYISLLDAPA NTPIRDLKAF KRTKLAAGES
TELEFNLPAR VLTYIDDNGK TQTYTGRVEV TVGSGQKGYV KENAIAVATI NVQ
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