| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1478 |
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| Symbol | |
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| ID | 3965215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1900885 |
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| End bp | 1904757 |
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| Gene Length | 3873 bp |
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| Protein Length | 1290 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637920555 |
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| Product | phosphoribosylformylglycinamidine synthase |
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| Protein accession | YP_526952 |
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| Protein GI | 90021125 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01735] phosphoribosylformylglycinamidine synthase, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.704135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATCC TGCCTGGCGC TCCCGCCCTG TCTGATTTTC GACTTCAAAA ACTTTTACAG
CGTTGCACCG ATTTAGGTAT AGCCGTTACC GGCTTAAGCG CAGACTACGT GCACCTTATC
GATGTGGAGA GCGAACTTAG CCAAGATGAG CACGAAACAT TGGTTAAATT GCTTACTTAC
GGGCCTAAAA TTGAGGCCGC AAGCGTAGAA GGGGTAGAGC TAGTTGCTGT ACCGCGCCCA
GGCACAATAT CTCCGTGGTC CTCTAAGGCA ACAGATATCG CTAAAAATGC AGGTCTTACC
AAGGTACGTC GCATTGAGCG CGGTATTCAT TACCGTATTG CCGCAGGTGC CAGCCAAGCC
GCACTAGAGC AAATTAAGCC ACTGCTATTT GACCGCATGG TGGAATCGTT ATTAAACAGC
CCCGAAGAGG GCGCTGCTTT ATTCCGCGCA GAGTCTCCTA AGCCTTTAAG CTACGTAGAT
ATTCTTGGTG CTGGCCGCCA AGCGTTGGTA GAAGCTAACG GTACTTTAGG TTTGGCGCTT
GCCGAAGATG AAATAGATTA CCTTGTTGAA TCGTTCGAAG GCTTGGGCCG CAACCCTACC
GATGTAGAGC TGATGATGTT TGCTCAAGCG AACTCCGAGC ATTGCCGCCA CAAAATATTC
AATGCGAGCT GGACTATCGA TGGCAAAGAA ATGCCGCGCT CACTGTTTAA AATGATCAAA
AACACCTACG AACTCGGTGG CGAAAACGTA TTGTCTGCCT ATGCAGATAA CGCCTCTGTA
GTAACCGGTA GTGTAGCGGG GCGATTTTTC CCCAACCCAG AAACTAAAAC GTTTGCTTAT
ACCGAAGAGC CAATTCATCT GTTGATGAAA GTGGAAACGC ATAACCACCC AACTGCCATT
GCGCCTTTCC CTGGTGCGGG TACTGGTTCG GGGGGCGAGA TTCGCGACGA GGGTGCAGTT
GGTAAAGGCT CTAAGCCAAA GGCGGGCTTG AGCGGCTATA CCGTATCGAA CTTACAAATT
CCAGATTACA CCTTGCCTTG GGAAACCCCC TACGGCAAAC CCGATCGCAT TGTGAACGCG
CTAGATATTA TGATTGAAGG CCCAATAGGC GGCGCTGCGT TTAACAATGA GTTTGGTCGC
CCGAATATCT GTGGTTACTT CCGTACCTTT GAAGAAGACT TCGACGGCGA GCGTCGTGGT
TACCACAAGC CCATCATGTT GGCCGGTGGT TACGGCAATA TTCGCGAAGA ACATATTGCG
CAAACCGAAT ACGATGCGGG CAGTAAGCTG GTTGTATTGG GCGGCCCAGC TATGTTGATT
GGCTTAGGCG GTGGTGCTGC ATCTTCTATG GCATCTGGTA GCTCTAGCGA AGATCTCGAT
TTTGCGTCGG TACAGCGCCA AAACCCAGAA ATTGAACGTC GTTGCCAAGA AGTGATCGAC
CAATGCTGGC AGCTAGGTGA AAATAACCCA ATCGCCTTTA TTCACGATGT GGGTGCAGGT
GGTTTATCTA ACGCCTTCCC AGAGCTTGCT AAAGATGGTG GCTGCGGTGC AATTTTTGAT
ATCCGTAAAG TGCCTAACGA CGAGCCAGGT ATGTCGCCAT TAGAAATATG GTGTAACGAA
TCGCAAGAGC GTTACGTAAT GGCTATACCG CCAGAGCGTT TAGCCCAATT CGAGGCGATT
TGTGAGCGTG AGCGTTGCCC TTACGCCGTT GTGGGCGAAG CAATAAGCGA GCAAACACTG
CAGGTAAAAG ACACCCTATT GAATGCAAAC CCAGTCGACC TGCCTATGAG TGTGTTGTTT
GGCAAAGCGC CTAAAATGCA CCGCACAGCA GAAACACGCA CCTATAACAC GCCAGAATTT
GATATTACTG GTTTAAGTGT ACAAGACGCT GCCGAGCGCG TTATTCAGCA CCCAGCAGTG
GCAAGTAAGC AGTTCCTTAT TACAATTGGT GACCGCTCCG TAACCGGTCA GGTTGTGCGC
GATCAAATGG TAGGCCCGTG GCAAGTGCCC GTGGCAGACT GCGCGGTAAC TACAGTAAGT
TACGATAGCT TCGCTGGTGA AGCTATGAGC ATGGGCGAGC GTACGCCGCT GGCGCTTATT
GATGCTCCCG CTTCTGGTCG CATGGCGGTG GGCGAAGCCA TTACAAACAT TGCCGCCACC
CGTATTGGCG ACATAAAAGA TATTAAACTT TCAGCCAACT GGATGTGTGC TGCAGGCCAC
CCAGGTGAAG ATGCCAAGCT ATACGAGACC GTAGAAGCTG TAGGTATGGA TATTTGCCCA
GCGTTGGGCT TAACCATTCC TGTGGGTAAA GACTCCATGT CTATGCGTAC CGCATGGCAG
GAAAACGGCG AAGATAAATC GGTAACCTCA CCGCTATCTG TAGTCATTTC TGCTTTTGCG
CCCGTTGTCG ATGTGCGCAA AACACTTACT CCCGAATTAA AAACCGTAGC CAACAAAATA
CTACTTGTAG ACCTCGCTGC AGGTGAGCAG CGTTTAGGCG GTTCTATACT GGCGCAGGTG
TACAATCAAA TAGGCACCGG CGCGCCCGAT GTCGATAACG CCGCTAGCTT AAAAGCGTTT
TTTAACGCAA TGCAGGCGTG TTTAGAGCAA GACTTGCTAC TTGCCTATCA CGATCGCAGC
GATGGTGGCT TATATGCAGC CTTAGCTGAA ATGTGTTTTG CTGGCCGCTG CGGCGCCACA
GTAGATATTG CCGCTCAAGT AGCGAACGGC TCTGAATTAG GTGCCTTGTT TAACGAAGAG
TTGGGCGCGT TGCTGCAAGT TGCTAGCGAT AAACTGGCTA CAGTAGAAGC TATATTCGAG
CAGCACGGCT TGGGTACATC GCTTAGCGTA TTAGGTGAAG CTACCGCCAA TGAAAATATT
ATTTTCAATA ATGGTGATGC AACGGTACTT AATCAAACGC GTGCAGCACT GCAAAAACTG
TGGAGCCTGA CGAGTTACAA CGTGCAAAAG CTGCGCGATA ACCCAGAGTG TGCCGAGCAA
GAATTTGCCG CAATAGAAGC TAAGAATACA GGCTTAATAA ACAAACTAAG CTTCGACCCG
CAACAAGATA TTGCTGCACC TTATATTGCC AAAGGCGTTA AGCCTAGCGT TGCAATTTTA
CGTGAGCAGG GTGTAAACAG CCAAAACGAA ATGGCTGCAG CATTTGACCG CGCAGGCTTT
AGCGCCGTAG ACGTTCATAT GAGCGATATC CTAAGTGGTC GTGTTAGCTT AGAGCAATTT
AAAGGCCTAG CCGCTTGCGG TGGTTTCTCT TACGGTGACG TACTGGGTGC CGGCGAAGGT
TGGGCAAAAA CCATTTTGTT TAATGCCCAA GCGCGCGATC AATTCCAAGC GTTTTTTAAC
CGCGAAGATA CCTTCAGTTT AGGTGTGTGT AACGGTTGCC AAATGCTCTC TAACTTGAAG
AGCTTAATTC CTGGTACCGA GCTGTGGCCA CATTTCGTGC GCAACGTATC GGAGCAGTTC
GAAGCGCGCT TTAGCTTAGT TAAAGTAGAG CAGTCTGCTT CTGTATTGCT AGGTGATATG
GCAGGCTCTT ATTTGCCTGT TGCTGTATCT CACGGTGAGG GTCGTGCCGA GTTTGCCAAT
AGCGCTGCTG TAAGCGCCTT AGAAAGCTCT GGCACCGTTG GTATGCGCTT TGTTACTTCC
GACCTTGCAA CCGCAACCAC TTACCCGGCC AACCCCAATG GTTCGCCTAA CGGCATTACA
GGGTTGTGTT CGGCAGAAGG TCGCACCACT ATTATGATGC CGCACCCAGA GCGTGTTTTC
CGCAAAGTTA CAAACTCGTG GAATGATGGC GAAGCAGGCG AGTACAGCGG TTGGATGCGA
TTATTCCGCA ACGCGAGAGT ATTTGTAGAT TAA
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| Protein sequence | MLILPGAPAL SDFRLQKLLQ RCTDLGIAVT GLSADYVHLI DVESELSQDE HETLVKLLTY
GPKIEAASVE GVELVAVPRP GTISPWSSKA TDIAKNAGLT KVRRIERGIH YRIAAGASQA
ALEQIKPLLF DRMVESLLNS PEEGAALFRA ESPKPLSYVD ILGAGRQALV EANGTLGLAL
AEDEIDYLVE SFEGLGRNPT DVELMMFAQA NSEHCRHKIF NASWTIDGKE MPRSLFKMIK
NTYELGGENV LSAYADNASV VTGSVAGRFF PNPETKTFAY TEEPIHLLMK VETHNHPTAI
APFPGAGTGS GGEIRDEGAV GKGSKPKAGL SGYTVSNLQI PDYTLPWETP YGKPDRIVNA
LDIMIEGPIG GAAFNNEFGR PNICGYFRTF EEDFDGERRG YHKPIMLAGG YGNIREEHIA
QTEYDAGSKL VVLGGPAMLI GLGGGAASSM ASGSSSEDLD FASVQRQNPE IERRCQEVID
QCWQLGENNP IAFIHDVGAG GLSNAFPELA KDGGCGAIFD IRKVPNDEPG MSPLEIWCNE
SQERYVMAIP PERLAQFEAI CERERCPYAV VGEAISEQTL QVKDTLLNAN PVDLPMSVLF
GKAPKMHRTA ETRTYNTPEF DITGLSVQDA AERVIQHPAV ASKQFLITIG DRSVTGQVVR
DQMVGPWQVP VADCAVTTVS YDSFAGEAMS MGERTPLALI DAPASGRMAV GEAITNIAAT
RIGDIKDIKL SANWMCAAGH PGEDAKLYET VEAVGMDICP ALGLTIPVGK DSMSMRTAWQ
ENGEDKSVTS PLSVVISAFA PVVDVRKTLT PELKTVANKI LLVDLAAGEQ RLGGSILAQV
YNQIGTGAPD VDNAASLKAF FNAMQACLEQ DLLLAYHDRS DGGLYAALAE MCFAGRCGAT
VDIAAQVANG SELGALFNEE LGALLQVASD KLATVEAIFE QHGLGTSLSV LGEATANENI
IFNNGDATVL NQTRAALQKL WSLTSYNVQK LRDNPECAEQ EFAAIEAKNT GLINKLSFDP
QQDIAAPYIA KGVKPSVAIL REQGVNSQNE MAAAFDRAGF SAVDVHMSDI LSGRVSLEQF
KGLAACGGFS YGDVLGAGEG WAKTILFNAQ ARDQFQAFFN REDTFSLGVC NGCQMLSNLK
SLIPGTELWP HFVRNVSEQF EARFSLVKVE QSASVLLGDM AGSYLPVAVS HGEGRAEFAN
SAAVSALESS GTVGMRFVTS DLATATTYPA NPNGSPNGIT GLCSAEGRTT IMMPHPERVF
RKVTNSWNDG EAGEYSGWMR LFRNARVFVD
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