| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1477 |
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| Symbol | |
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| ID | 3966194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1898937 |
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| End bp | 1900442 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920554 |
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| Product | putative transglycosylase |
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| Protein accession | YP_526951 |
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| Protein GI | 90021124 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAA TTTTGCTAAA TACGGCTTCA ACGGTGCTAA CCCGCCTGTG GAAGTTGAGC
CTATTGGGGC TTGTGTTTGC CGTAGCAGCC GCAACGCTAG TTAGTAGTCG CATTCCCACC
ACATTAGAAG AAGTTAAAAG CAGCGGTAAG CTCATCGTTA TTTCACGCAA CGGCCCCACC
ACCTATTACG AAGGCCCAGC AGGCCACACC GGCTTTGAAT ATGTAATGGC AAAAGCGTTT
GCCAAGCACT TGGGCGTAGA CCTAGAAGTG CGAGAAATTG AAGATTTAGG TGAAATGCTC
GATAAAGTGG GCACTAAAGC AGGACACTTA GCCGCTTCGG GCTTAACCGT AACAGAAAAA
CGCGCCCGCA AAGTGCTTTT TGCCGAGCCT TACTTGCAAG TTACTCAGCA ACTTATTTAT
CGCTCAGGTG AAAGCAAGCC CGAAACTATC GAAGATTTAT ACGGCAAGCG AGTGATGGTA
ATTTCAAACA GCTCGCATTC GGAACGATTA AAAGAATTAC AGCGCGAATA CCGCGACCTA
GCATGGGAAG AGCAGCACGA TGTAGATATG CTCGACCTGT TAGAAATGGT ACACAACGGC
AAAATTGATT ACACCATTGT CGATTCGAAT GCTTACCAAA TTAATCGCCC TGTTTACCCC
AAAGCCACCG TGGCTTTTGA TATTTCTGAA CCGCAAGACT TAGCATGGGC CTTCCCGCAA
CAAAAAGATG CAAGCCTATA TAACGAAGCG CAGAAATTCT TTAAAGATAT TAAGCAAACC
GGTGCCATTG ATGATGCAAT GGAAACCTTT TACGGTCACC TTGGCGAAAT TGATTACAGT
GGCGCAATAT TATTTGCTCA CCGTTTACAA TCGCGCTTAC CCAAATGGGA AACGCACTTA
AAAGCCGCTG CCGAAAAAAA TGATTTAGAC TGGCAATTGC TCGCCGCACT TAGCTATCAA
GAGTCGCACT GGAACCCTAA AGCTAAATCC CCTACTGGTG TGCGCGGTTT TATGATGCTC
ACATTGAATA CCGCTAAAGA AGTGGGTGTA AAAAATAGAT TAAACGCCGA GCAAAGTATT
TATGGCGGTG CGCGTTATTT CAAATCTTTA CACGGCCGTC TTCCAGAAAG AATTAAAGAA
CCAGATCGCA CTTGGCTTGC GCTAGCGGCC TACAATATTG GCCTTGGTCA TTTAGAAGAT
GCGCGTATTC TCACAGAGCA CTTTGGCGGC AACCCCGATA AATGGGCCGA TGTAAAACAG
CAATTGCCAT TATTAGCAAA AAGAAAATAT TACAAGTTTA CTAAACACGG CTATGCCCGC
GGCTGGGAAG CAGTCGATTA CGTACAAAAT ATTCGCAACT TCCACACTAT TATTGCGTGG
AACGAAATTG AAAATCAGCG TTTACAGCAA CTGGCTCAAA ACGAAAATCA CGTAAGCGAT
TACGCCCAAT TTAGCCCCAC TGTTACCGAA GCGGTAAAAA GCATAAGCGG TACATCTTCG
CTATAA
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| Protein sequence | MTKILLNTAS TVLTRLWKLS LLGLVFAVAA ATLVSSRIPT TLEEVKSSGK LIVISRNGPT
TYYEGPAGHT GFEYVMAKAF AKHLGVDLEV REIEDLGEML DKVGTKAGHL AASGLTVTEK
RARKVLFAEP YLQVTQQLIY RSGESKPETI EDLYGKRVMV ISNSSHSERL KELQREYRDL
AWEEQHDVDM LDLLEMVHNG KIDYTIVDSN AYQINRPVYP KATVAFDISE PQDLAWAFPQ
QKDASLYNEA QKFFKDIKQT GAIDDAMETF YGHLGEIDYS GAILFAHRLQ SRLPKWETHL
KAAAEKNDLD WQLLAALSYQ ESHWNPKAKS PTGVRGFMML TLNTAKEVGV KNRLNAEQSI
YGGARYFKSL HGRLPERIKE PDRTWLALAA YNIGLGHLED ARILTEHFGG NPDKWADVKQ
QLPLLAKRKY YKFTKHGYAR GWEAVDYVQN IRNFHTIIAW NEIENQRLQQ LAQNENHVSD
YAQFSPTVTE AVKSISGTSS L
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