Gene Sde_1476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1476 
Symbol 
ID3966193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1898340 
End bp1898870 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content49% 
IMG OID637920553 
ProducttRNA-adenosine deaminase 
Protein accessionYP_526950 
Protein GI90021123 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.969851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGACG TTATACACGG CGATGAGCAT TGGATGCGCG AAGCGCTAAA ACTTGCCGAG 
CTGGCAGCGG CAGAACACGA AGTACCCGTT GGCGCGGTAG TGGTGCGCGA TAATAAAATA
TTGGGCAGTG GCTTTAATAC GCCTATTTCT GGGTGCGACC CAACCGCACA TGCCGAAATA
ACTGCGCTTA GGCAAGCGGC TAAAAACGAA CACAATTACA GGCTGCCAGA TGCAACGCTT
TATGTAACTA TCGAGCCGTG CACTATGTGC TTAGGTGCAA TTATGCATGC GCGAGTAGCG
CGTGTGGTAT ACGGGGCAAC CGAGCCGAAA GCGGGTGTTA TTTACAGTAA CCCGGTGTGG
CAGCAGGGTG GTTTTTTTAA TCATCAAGTT GAGTGGTGTG GCGGTGTACT TGCCAATGAA
GCAACGGCGT TAATTCAACA ATTTTTTAAG CAGCGTAGAG AAGCTAAAAA GCAGCTAAAG
CGCTTGGCAA ACGGTGATGA GAAAAACGTT AGTGAATTGC ATAAAGAATA G
 
Protein sequence
MNDVIHGDEH WMREALKLAE LAAAEHEVPV GAVVVRDNKI LGSGFNTPIS GCDPTAHAEI 
TALRQAAKNE HNYRLPDATL YVTIEPCTMC LGAIMHARVA RVVYGATEPK AGVIYSNPVW
QQGGFFNHQV EWCGGVLANE ATALIQQFFK QRREAKKQLK RLANGDEKNV SELHKE