| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1475 |
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| Symbol | |
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| ID | 3966192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1897463 |
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| End bp | 1898347 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637920552 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_526949 |
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| Protein GI | 90021122 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTA TTTGCCCGAA TTGCAGCTTG CCGTTAACCC AAGAGCCTAA TAGCAAAAAC
CTGCGGTGCG AGAATAATCA CAGTTTCGAT TGTGCGCGGC AGGGGTATTA CAATTTACTT
TTAGCAAATC AAAAAGCGAG TAAAGAGCCG GGCGATACTA GCGAAATGCT GCAAGCAAGA
AACCGGTTTT TAGAAACAGG TAAATACAGC TTTTTAGTGC GCGCTATTGG CGATGTAATA
AGCAAATATT TGGCGCGTGC CGAGCTAGAA AATACAGCGT TTACTTTATT CGATTGCGGT
TGTGGCGAAG GTTATTACAC GCGCGAATTG CAAAAGCGTT ATTGTTCACT GCCTAGCGAA
TACTACTGCA TAGATATCGC AAAAAACGGT GTAAAGATGG CAGCTTCGCA GACAAAGCTC
GCTAAACAAA ATATAGAAAT ACATACCGAT GCTAATACCG CGTTGTTGAG TGCAAACTTT
GCAGTGGCAA GTAGTGCGAA CTTGCCGGTG GCTGGTAATA TTTTTGATGT GTTTTTATCT
ATATTCGCGC CATTTAACGA AACGGAAGTA GCGCGTATTT TAAAACCCGG TGGTATTTTT
ATTCGGGTTG CGCCTGGGCC CAATCACTTG TTTGAACTTA AGCAGCAGCT ATATACAACG
CCGCAAAAAC ATACTGCACC AGATGTGCCC GTCGGTTTTA AAATGTTGAA CGAACAATGC
ATAACCAATC AAGTTAAGTT CGACAATGAA GCGCAATTTA GCGATTTGCT TTATATGACA
CCGTTCGCAT ATAAAGGTAT GCGCGAAGCG AAGCAGACGT TGTACTTACC TAACAATAAT
CAAATTACCG CTGAATTTTT TGTGCAGGTG CTAGCTTGTG AATGA
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| Protein sequence | MSFICPNCSL PLTQEPNSKN LRCENNHSFD CARQGYYNLL LANQKASKEP GDTSEMLQAR
NRFLETGKYS FLVRAIGDVI SKYLARAELE NTAFTLFDCG CGEGYYTREL QKRYCSLPSE
YYCIDIAKNG VKMAASQTKL AKQNIEIHTD ANTALLSANF AVASSANLPV AGNIFDVFLS
IFAPFNETEV ARILKPGGIF IRVAPGPNHL FELKQQLYTT PQKHTAPDVP VGFKMLNEQC
ITNQVKFDNE AQFSDLLYMT PFAYKGMREA KQTLYLPNNN QITAEFFVQV LACE
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