Gene Sde_1469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1469 
Symbol 
ID3966186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1892543 
End bp1893397 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content44% 
IMG OID637920546 
Productglutamine cyclotransferase-like 
Protein accessionYP_526943 
Protein GI90021116 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3823] Glutamine cyclotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAA GGCCTAACTT AGGCTACACA TTACCCATAC AAAAAACGCC CATGCCAACC 
CAAAAACCTA ATACTAAACA CACCACCACA AGCATAATTG CAGCCGTTAG CTTGGCCCTA
AGTTTATGTA TTACCCCCTA TGCTAACGCC GCTAAACAGC TTGCATTTGA GGTGCTCAAA
ACCCTGCCTC ATAACTCCAC CACTTTTACA CAGGGCTTAC TGGTAGCTGG CGACCAACTA
ATCGAAAGTA GCGGCCTTTA CGGCAAATCA TTTATTGCCA GCTACAACAA AGAAACGGGC
GAACAAACCT ACAAAATCCC CCTACCCAAA CGGGTATTTG CAGAAGGCTT AACACGTATA
AACGACACGC TGTACTTGTT AACATGGAAA GAAAATAAAC TACTGCGCTT CAATGCAACG
ACCCGTGAAG CTTTAACCCC ACTTAGTTAC GAAGGCGAAG GCTGGGGCCT CACCCATACA
GACAACTTAT TTTTAATGAC CGACGGCAGT GAGCATTTAT ACCTGCGCAG CCAGAAGGAC
TTTCGCGTAC TTAAAAAAGT AAAAGTACAC GACCAAAATA AAATCTACCG ATTTTTAAAC
GAACTAGAGT ATGCACAAGG GCATTTATGG CTTAATGTGT GGCAAACTAA TCAAATATTG
CGTGTTAACT ATCACACAGG TGAAGTGACC GGAATTTTAG ACCTCACTTC GTTACAAAAG
CAAAACGGTG GCAACCCTAA GCAAGCCGTA TTAAACGGTA TTGCCTACGA CCCCGAACAC
AATGCCTACT GGGTAACAGG CAAATATTGG CCCAAACGCT ACTTAATAAA AATTTCCACA
CCCGTCACAC AATAA
 
Protein sequence
MSKRPNLGYT LPIQKTPMPT QKPNTKHTTT SIIAAVSLAL SLCITPYANA AKQLAFEVLK 
TLPHNSTTFT QGLLVAGDQL IESSGLYGKS FIASYNKETG EQTYKIPLPK RVFAEGLTRI
NDTLYLLTWK ENKLLRFNAT TREALTPLSY EGEGWGLTHT DNLFLMTDGS EHLYLRSQKD
FRVLKKVKVH DQNKIYRFLN ELEYAQGHLW LNVWQTNQIL RVNYHTGEVT GILDLTSLQK
QNGGNPKQAV LNGIAYDPEH NAYWVTGKYW PKRYLIKIST PVTQ