Gene Sde_1462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1462 
Symbol 
ID3966179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1887265 
End bp1887627 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content40% 
IMG OID637920539 
Producthypothetical protein 
Protein accessionYP_526936 
Protein GI90021109 
COG category[S] Function unknown 
COG ID[COG3094] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.211632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCAG TAATTAAACA CATTCACGTA TGGCTCGTGC TATTAAGTAT TGGCGGGTTT 
GCCGTTAGAT TTCTTTGGCT AATGGGAAAC TCTTCCAAAC TTCAATTGCG TGCAGTAAAA
ATTGCACCAC ATGTTATTGA TACCCTTTTA CTTGTTACCG GTGTAACCCT TGCGGTAATG
CTTCGCTACT CGCCATTTGA CTATTCTTGG TTTTCAATCA AATTACTTTT GGTTATTACC
TATATTGGCT TAGGTATCAC TGCCTTCAAA ATCCCCCATA AACACCTGCG CGCAATTTTT
GGAATTAGTG CCCTCTTAAC TGCTTGCGCA ATTATTATAT TGGCCACCAG TAAGCCGTTT
TAA
 
Protein sequence
MFAVIKHIHV WLVLLSIGGF AVRFLWLMGN SSKLQLRAVK IAPHVIDTLL LVTGVTLAVM 
LRYSPFDYSW FSIKLLLVIT YIGLGITAFK IPHKHLRAIF GISALLTACA IIILATSKPF