| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1458 |
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| Symbol | |
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| ID | 3966175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1881381 |
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| End bp | 1882745 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637920535 |
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| Product | exodeoxyribonuclease VII large subunit |
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| Protein accession | YP_526932 |
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| Protein GI | 90021105 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACG ATATTTTTAG CCAAACCAAC CAAATTACAG CCAAGCGTGG CGGCGAGCGC
AAAACTTTTT CTGTGGAAGA GCTTAACCGC AGAGTAAAAG ACCTGCTTGA AGTACACCTG
CCCCTTATTT GGGTAGAAGG TGAAATTTCT AACTTTAGCG CCCCTGCCTC TGGCCACTGG
TACTTCACCC TAAAAGACGA GCGCGCACAG GTGCGCTGTG CCATGTTTAA GGGCCGCAAC
CAGCAGGTAA AATTTCGCCC AAAAGCGGGC GATAAAGTGC TGCTGCGCGC CCGCGTAAGC
CTGTATGAGG GTCGCGGCGA TTTTCAGCTT ATTGCCGAGC ACATGGAAGA GTCTGGGTTT
GGCCTATTAC AACAGCGTTA CGAAGCCCTA AAAGCACAGT TACTAAATGA AGGCCTGTTT
AACGAGGCAG ATAAACAACC GATTCCCACA CTGCCAAACC ATATAGGCAT TATCACATCG
CCCACAGGGG CTGCCGTGCG GGATGTACTA TCGGTATTAC AGCGCCGCTT CCCCAGTATT
CCGGTAACGG TGATCCCTGC CCCTGTGCAA GGGGATGACG CGCCCGCAAA ACTCATACAG
GCAATAGACA TTGCCGAGAA TTCAGGCCTT TTTGATGTGC TTTTGCTGTG CCGCGGCGGC
GGCTCGATAG AAGACTTATG GGCCTTTAAC AATGAAGCGC TGGCGCGCCG CATTTACGAA
TGCGATATAC CCATTGTGAG CGCAGTGGGT CACGAGGTAG ATTTTACCAT TGCCGACTTT
GTTGCAGATT TACGCGCCCC CACCCCTTCG GCTGCGGCTG AACTGCTGTG CCCAAACAAA
ACAGATATCG ACCAATTGCT ACAACATTTT GCCAAGCAGC TTAAACAGCG CCTACACCAG
CGTTTAAGCC AATACGCTCA GGCAGTAAAT CACCTGCGCA CAAGGCTAAA GCACCCTGGC
GAGCGCCTAA ATGCGCGAGC GCAACAATTG GATCAATTAG AAATTCGTCT TACCCGCGCC
ATACAGTTGC GCTTACAAAA AGACGGCACC ACACTTAGAA ACCGCGAGCA GCGCTTAACC
CAGCAGCACC CTCAAAAGTT GCTTGCGCAG CATCAAAAAG ATCTCGCAAA ACTTCGCTTA
CAATTAAACC AAGCCATTAG CCGTTTGCTA GATAAAAAAA CAGACAGACT GCAAAGAGCC
GTTGCACTGC TTGATATTGC TAGCCCCCTG GCAACCCTTA AGCGCGGCTA CTCCATAACG
ACTAAGGCTG ACGGCACGGT TATACGCACG CCGGCCGACA CCCCAAAAGG CGAAACCATT
CATATTAAGC TTGCCGAGGG TGAACTATCC GCAAAAATTA ACTAG
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| Protein sequence | MQNDIFSQTN QITAKRGGER KTFSVEELNR RVKDLLEVHL PLIWVEGEIS NFSAPASGHW
YFTLKDERAQ VRCAMFKGRN QQVKFRPKAG DKVLLRARVS LYEGRGDFQL IAEHMEESGF
GLLQQRYEAL KAQLLNEGLF NEADKQPIPT LPNHIGIITS PTGAAVRDVL SVLQRRFPSI
PVTVIPAPVQ GDDAPAKLIQ AIDIAENSGL FDVLLLCRGG GSIEDLWAFN NEALARRIYE
CDIPIVSAVG HEVDFTIADF VADLRAPTPS AAAELLCPNK TDIDQLLQHF AKQLKQRLHQ
RLSQYAQAVN HLRTRLKHPG ERLNARAQQL DQLEIRLTRA IQLRLQKDGT TLRNREQRLT
QQHPQKLLAQ HQKDLAKLRL QLNQAISRLL DKKTDRLQRA VALLDIASPL ATLKRGYSIT
TKADGTVIRT PADTPKGETI HIKLAEGELS AKIN
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