Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1450 |
Symbol | |
ID | 3966167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1874830 |
End bp | 1875690 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637920527 |
Product | hypothetical protein |
Protein accession | YP_526924 |
Protein GI | 90021097 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCCTG AAATACTATT TCAAATTCTT GTGTTGCTGT TCGCAGGCTT GGTTGCTGGT TTTTTAGCCG GTTTGTTTGG CGTTGGGGGG GGGATAGTGA TTGTGCCCGC CCTGTACGCA CTATTTCGTT GGATGGAGGT AAGCGCTAAC AGTGCTATAA GCATTGCGGT TGGTACATCG TTAGTCACAC TTTTACCTAC GGCATGTTCT TCTTTACGAG CCCATTACAA ATTGGGAAAC GTAAATAAAA ATATTCTACT TTGGATTGCG CCCTTCATTT TAATGGGGGC CATTATTGCT AGCTCGTTGG TTGTGGCGCA ATTTGGACGA TTATTGTTGT TTGTGTTTTC TGGCGTGCTG TTGCTGGTTG CATGTATAAC CATAGTGCGA ACTTACCGTA TTACACCCGC TGTTGAGCAC TACACAATAA ACGCGGAGCC CACGCTTAAA GGTGTGCTTA TTAGAGTTAT GGCTTCTATT GCGGGTTTTC TAATAGGGCT TTCTTCTTCG CTCGCGGGTG TGGGTGGTGG GGCCACTGGC GTGCCAGTGT TGTTAGGGTT GGGGTTACGC ACCCACGCCG CTATTGGCAC GGCTTCTAGC TTTGGGGTGT TAGTTGCACT GCCGTCAATT ATTGCTTTGT TACTTTTTTC TTACTCGCCA GCAGATGCCC CCTGGGGGTG TTGGAAGCAA GTCTATATAC CCGGTTTAGT GGTACTAAGT TTTTGCACTG TGCTTGTTGC GCCCTATGGT GCTAGGCTTG GCAAAAAAAT ATCGGAAAAA CGTTTAAAAG TGTTTTTTGC GAGTTTGCTG TTTGTTGTTG GTGCAAGGCT GCTGGTGAGT AGTTTTATGT TTCCCGTTTA A
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Protein sequence | MPPEILFQIL VLLFAGLVAG FLAGLFGVGG GIVIVPALYA LFRWMEVSAN SAISIAVGTS LVTLLPTACS SLRAHYKLGN VNKNILLWIA PFILMGAIIA SSLVVAQFGR LLLFVFSGVL LLVACITIVR TYRITPAVEH YTINAEPTLK GVLIRVMASI AGFLIGLSSS LAGVGGGATG VPVLLGLGLR THAAIGTASS FGVLVALPSI IALLLFSYSP ADAPWGCWKQ VYIPGLVVLS FCTVLVAPYG ARLGKKISEK RLKVFFASLL FVVGARLLVS SFMFPV
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