Gene Sde_1450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1450 
Symbol 
ID3966167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1874830 
End bp1875690 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content46% 
IMG OID637920527 
Producthypothetical protein 
Protein accessionYP_526924 
Protein GI90021097 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCCTG AAATACTATT TCAAATTCTT GTGTTGCTGT TCGCAGGCTT GGTTGCTGGT 
TTTTTAGCCG GTTTGTTTGG CGTTGGGGGG GGGATAGTGA TTGTGCCCGC CCTGTACGCA
CTATTTCGTT GGATGGAGGT AAGCGCTAAC AGTGCTATAA GCATTGCGGT TGGTACATCG
TTAGTCACAC TTTTACCTAC GGCATGTTCT TCTTTACGAG CCCATTACAA ATTGGGAAAC
GTAAATAAAA ATATTCTACT TTGGATTGCG CCCTTCATTT TAATGGGGGC CATTATTGCT
AGCTCGTTGG TTGTGGCGCA ATTTGGACGA TTATTGTTGT TTGTGTTTTC TGGCGTGCTG
TTGCTGGTTG CATGTATAAC CATAGTGCGA ACTTACCGTA TTACACCCGC TGTTGAGCAC
TACACAATAA ACGCGGAGCC CACGCTTAAA GGTGTGCTTA TTAGAGTTAT GGCTTCTATT
GCGGGTTTTC TAATAGGGCT TTCTTCTTCG CTCGCGGGTG TGGGTGGTGG GGCCACTGGC
GTGCCAGTGT TGTTAGGGTT GGGGTTACGC ACCCACGCCG CTATTGGCAC GGCTTCTAGC
TTTGGGGTGT TAGTTGCACT GCCGTCAATT ATTGCTTTGT TACTTTTTTC TTACTCGCCA
GCAGATGCCC CCTGGGGGTG TTGGAAGCAA GTCTATATAC CCGGTTTAGT GGTACTAAGT
TTTTGCACTG TGCTTGTTGC GCCCTATGGT GCTAGGCTTG GCAAAAAAAT ATCGGAAAAA
CGTTTAAAAG TGTTTTTTGC GAGTTTGCTG TTTGTTGTTG GTGCAAGGCT GCTGGTGAGT
AGTTTTATGT TTCCCGTTTA A
 
Protein sequence
MPPEILFQIL VLLFAGLVAG FLAGLFGVGG GIVIVPALYA LFRWMEVSAN SAISIAVGTS 
LVTLLPTACS SLRAHYKLGN VNKNILLWIA PFILMGAIIA SSLVVAQFGR LLLFVFSGVL
LLVACITIVR TYRITPAVEH YTINAEPTLK GVLIRVMASI AGFLIGLSSS LAGVGGGATG
VPVLLGLGLR THAAIGTASS FGVLVALPSI IALLLFSYSP ADAPWGCWKQ VYIPGLVVLS
FCTVLVAPYG ARLGKKISEK RLKVFFASLL FVVGARLLVS SFMFPV