| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1442 |
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| Symbol | |
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| ID | 3966159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1863304 |
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| End bp | 1863810 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637920519 |
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| Product | sigma-24 (FecI-like) |
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| Protein accession | YP_526916 |
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| Protein GI | 90021089 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.558792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGCTA CCGATAAATT AATTTCGCTT TACGAAAAAT ACCGGTCTGA CCTAGGTGGT
TTAATCGCAA CGAAGTTTAA AAAGAATCAG CACGATGCGG AAGACATTGT TCAAGATGCT
TTCTACAATG TATTGCGCGC AAAAAATATA GATACGATCG ATAACCCAAA GGCGTACTTG
TATCAAGCCG CTTCAAATTT AGCGTTAAAC CGCATTCGTA AAAATAATTA TCATCGCGAT
TACATTGCTA GTATGGATGA CACTGCAGTA GATATGCTTA CCCCAGAGCG CAATGTACTG
GCGCAGCACG ACCTTAAAAT GTTGGAGACG GCAATGGATA AGCTACCGAA AAAATATCAA
ACCACGTTTT TAATGAGTCG TATGCATTCC AAAAGCTATA AAGAAATTGC CGCAGATCTA
AACATTGCCG AAAGCACAGT GGAAAAACAC ATTATAAAAA CCCTAAAGCA CCTGCGCAGC
CATTTGGATG AGGAGGTTGG GGTATGA
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| Protein sequence | MSATDKLISL YEKYRSDLGG LIATKFKKNQ HDAEDIVQDA FYNVLRAKNI DTIDNPKAYL
YQAASNLALN RIRKNNYHRD YIASMDDTAV DMLTPERNVL AQHDLKMLET AMDKLPKKYQ
TTFLMSRMHS KSYKEIAADL NIAESTVEKH IIKTLKHLRS HLDEEVGV
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