Gene Sde_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1439 
Symbol 
ID3966156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1858619 
End bp1859599 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content45% 
IMG OID637920516 
Productflavodoxin, long chain 
Protein accessionYP_526913 
Protein GI90021086 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACC TGCAAGCGGC TAACACAATA CTTAATACTA TTTTGCGCAG ATGCCCCCAC 
CCTTGCTTAA CAACTTGGCC TGCAATAATA GTGTTCGCGC TAACGTGTAA TATCGCAATT
GCAGCCGATA CCCAATCGCC TAATCCCGCA CAGAAAACCA ACCCACCTGC ACACTACAAC
CTTACCCACT ATTGCGGCGA ATCCGACAAT ATGGGAAACC AATATATAGA TAAGCTTATT
GAACTCGCAT TCTCTTACCA CCCTGCAACG GTAAGCATCG AAACCCTCGG CAATAGGTGC
AGCCACGCCC GCGAGAAAAA GCTACTAGAA GAAGGTAGGT CGGACATTTT CTGGGCTGCA
ACAACCAAAG AATTTGAAGC TACTTTAATT GCAATTCGAA TCCCCATTTT TCGAGGCCTG
TTGGGCCACC GAATAGCCAT TATCCCAAGG GAACACCAAG GTAAATACGC GAATGTAACC
ACAATGGAGC AAGTAAAGAA GCTTACTATT GGCCAAGGGC TGGACTGGAC AGATGCACGA
ATTTTAAAGG CCAACGGGTT TGACGTTACC GAAAGCGCAG ATGTGGAAAA CCTTTACCGC
ATGCTACTAG CAAACCGCTT TGATTTATTT TTAAGAGGTG TAATGGAGCC TTGGGATGAA
GTAAATCAAC ACCCACAGTT ACCCCTCGCG GTTGAACAAA ACTTAATGTT TATATACCGC
ATGCCTGCAT ACTTGTTTGT CACCCCCAAA AAACCCGACG TAGCAGCAAT AATAGAAAAC
GGGCTATGGC AGGCGCTAGA GGATGGCAGT TTTGATAAAG TATTAATTAA CGACCCCTTC
TTTAAAGAAG CCCTACAAAA GCTCAATGCA AAAAAACGCA CCATATTTTA TTTAGATAAC
CCACTGCTAC TGGACACCGC ACCGGTTGAT GACCCAAGGC TTTGGTTAGA CGTAACGACA
TTAAACGCCG CTGCGAACTA A
 
Protein sequence
MTNLQAANTI LNTILRRCPH PCLTTWPAII VFALTCNIAI AADTQSPNPA QKTNPPAHYN 
LTHYCGESDN MGNQYIDKLI ELAFSYHPAT VSIETLGNRC SHAREKKLLE EGRSDIFWAA
TTKEFEATLI AIRIPIFRGL LGHRIAIIPR EHQGKYANVT TMEQVKKLTI GQGLDWTDAR
ILKANGFDVT ESADVENLYR MLLANRFDLF LRGVMEPWDE VNQHPQLPLA VEQNLMFIYR
MPAYLFVTPK KPDVAAIIEN GLWQALEDGS FDKVLINDPF FKEALQKLNA KKRTIFYLDN
PLLLDTAPVD DPRLWLDVTT LNAAAN